Parental gene:

Mrto4, ENSMUSG00000028741

Aliases:Mrto4, 2610012O22Rik, Mg684, Mrt4
Description:MRT4, mRNA turnover 4, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1917152]
Organism:Mouse (Mus musculus)
Coordinates:4:139347434..139352576(-)


>ENSMUSG00000028741
ATGCCCAAATCCAAGCGAGACAAGAAAGTTTCTTTAACAAAAACTGCCAAGAAAGGCTTGGAACTGAAGCAGAACCTGAT
AGAAGAGCTTCGGAAATGTGTGGACACCTACAAGTACCTTTTCATCTTCTCTGTGGCCAACATGAGGAACAGCAAGCTGA
AAGACATCCGGAACGCCTGGAAACACAGCCGGATGTTCTTTGGCAAAAACAAGGTGATGATGGTGGCCTTGGGTCGAAGC
CCATCTGATGAATACAAAGACAACCTACATCAGGTCAGCAAGAAGTTGAGAGGTGAAGTTGGGCTGCTGTTTACCAACCG
CACGAAGGAGGAGGTGAATGAGTGGTTCACCAAGTATACAGAAATGGATTTTGCTCGAGCGGGGAACAAAGCAACTCTAA
CTGTGAGCCTGGATCCAGGGCCCCTGAAGCAATTCCCTCACTCCATGGAGCCACAGCTGAGGCAGCTGGGGCTGCCCACT
GCCCTCAAGAAAGGTGTGGTGACCCTGCTGTCTGACTATGAAGTATGCAAAGAGGGTGATGTGCTGACCCCAGAGCAGGC
CCGTATCCTGCTGTTTGGGTATGAGATGGCTGAATTCAAAGTGATCATCAAATACATGTGGGACGCCCAGTCGGGACGAT
TCCAGCAGATGGACGATGACCTGCCTGAGAGCGCGCCTGAGTCTGAGGGAGAGTCTGAGGAGGAGGATGACAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 13 .76 RPM
SRP007412_cerebellum 13 .68 RPM
SRP007412_heart 11 .80 RPM
SRP007412_kidney 11 .03 RPM
SRP007412_liver 13 .22 RPM
SRP007412_testis 27 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015189 ortholog_one2many 1 retrogene
retro_cfam_1353,
Callithrix jacchus ENSCJAG00000006812 ortholog_one2one 3 retrogenes
retro_cjac_1146, retro_cjac_1834, retro_cjac_3791,
Dasypus novemcinctus ENSDNOG00000010119 ortholog_one2one 6 retrogenes
retro_dnov_1051, retro_dnov_1545, retro_dnov_170, retro_dnov_1890, retro_dnov_2044, retro_dnov_2255,
Echinops telfairi ENSETEG00000001675 ortholog_one2one 5 retrogenes
retro_etel_1080, retro_etel_1162, retro_etel_1172, retro_etel_1887, retro_etel_2177,
Homo sapiens ENSG00000053372 ortholog_one2one 2 retrogenes
retro_hsap_1766, retro_hsap_1914,
Gorilla gorilla ENSGGOG00000000533 ortholog_one2one 2 retrogenes
retro_ggor_1400, retro_ggor_2244,
Macropus eugenii ENSMEUG00000000027 ortholog_one2one 1 retrogene
retro_meug_1606,
Microcebus murinus ENSMICG00000004019 ortholog_one2one 2 retrogenes
retro_mmur_1235, retro_mmur_733,
Myotis lucifugus ENSMLUG00000001566 ortholog_one2many 1 retrogene
retro_mluc_374,
Macaca mulatta ENSMMUG00000006695 ortholog_one2many 1 retrogene
retro_mmul_107,
Monodelphis domestica ENSMODG00000015874 ortholog_one2one 1 retrogene
retro_mdom_1694,
Mustela putorius furo ENSMPUG00000016181 ortholog_one2many 2 retrogenes
retro_mputfur_1177, retro_mputfur_1430,
Oryctolagus cuniculus ENSOCUG00000000274 ortholog_one2one 2 retrogenes
retro_ocun_1191, retro_ocun_951,
Otolemur garnettii ENSOGAG00000010713 ortholog_one2many 2 retrogenes
retro_ogar_1826, retro_ogar_2060,
Pongo abelii ENSPPYG00000001795 ortholog_one2one 2 retrogenes
retro_pabe_1535, retro_pabe_1548,
Pan troglodytes ENSPTRG00000000262 ortholog_one2one 2 retrogenes
retro_ptro_1182, retro_ptro_1248,
Rattus norvegicus ENSRNOG00000017979 ortholog_one2many 1 retrogene
retro_rnor_2967,
Ictidomys tridecemlineatus ENSSTOG00000028112 ortholog_one2one 1 retrogene
retro_itri_1551,
Tupaia belangeri ENSTBEG00000006502 ortholog_one2one 8 retrogenes
retro_tbel_1020, retro_tbel_1189, retro_tbel_1210, retro_tbel_1873, retro_tbel_1945, retro_tbel_2665, retro_tbel_394, retro_tbel_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_852 97.91 100.00
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2. retro_mmus_924 97.91 100.00
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Download FASTA sequences of all ENSMUSG00000028741 retrocopies