Parental gene:

Vamp3, ENSMUSG00000028955

Aliases:Vamp3, D130027G05Rik, VAMP-3, ceb
Description:vesicle-associated membrane protein 3 [Source:MGI Symbol;Acc:MGI:1321389]
Organism:Mouse (Mus musculus)
Coordinates:4:151047299..151057963(-)


>ENSMUSG00000028955
ATGTCTACAGGTGTGCCTTCGGGGTCAAGTGCTGCCACTGGCAGTAATCGAAGACTCCAGCAGACACAAAATCAAGTAGA
TGAGGTGGTTGACATCATGAGAGTCAATGTGGATAAGGTGTTAGAAAGAGACCAGAAGCTCTCGGAGCTAGATGACCGCG
CAGATGCACTGCAGGCAGGTGCCTCGCAGTTTGAAACAAGTGCTGCCAAGTTGAAGAGAAAGTATTGGTGGAAGAACTGC
AAGATGTGGGCGATAGGGATCAGTGTCCTGGTGATCATTGTCATCATCATCATCGTGTGGTGTGTCTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 26 .05 RPM
SRP007412_cerebellum 25 .84 RPM
SRP007412_heart 40 .38 RPM
SRP007412_kidney 39 .62 RPM
SRP007412_liver 15 .68 RPM
SRP007412_testis 44 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Monodelphis domestica ENSMODG00000005770 ortholog_one2many 1 retrogene
retro_mdom_273,
Otolemur garnettii ENSOGAG00000009797 ortholog_one2one 1 retrogene
retro_ogar_2300,
Procavia capensis ENSPCAG00000004825 ortholog_one2one 1 retrogene
retro_pcap_389,
Tarsius syrichta ENSTSYG00000007733 ortholog_one2many 6 retrogenes
retro_tsyr_1027, retro_tsyr_1435, retro_tsyr_1634, retro_tsyr_1757, retro_tsyr_524, retro_tsyr_968,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1851 86.41 99.03
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Download FASTA sequences of all ENSMUSG00000028955 retrocopies