RetrogeneDB ID: | retro_tsyr_524 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_133008:2496..2765(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000007733 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.11 % |
Parental protein coverage: | 92.78 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSAGAPAGSAA-TGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAK |
MSAGAPAGSAA..GSNRRLQQTQNQVDEVV.IMRVN.DKVLERDQKLSELDD.ADALQAGASQFETSAAK | |
Retrocopy | MSAGAPAGSAA<NGSNRRLQQTQNQVDEVVNIMRVNMDKVLERDQKLSELDDHADALQAGASQFETSAAK |
Parental | LKRKYWWKNCKMWAIGVTVLV |
LKRK..WKNCKMW.IG.TVLV | |
Retrocopy | LKRKH*WKNCKMWPIGITVLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Loxodonta africana | ENSLAFG00000000277 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000005770 | 1 retrocopy | |
Mus musculus | ENSMUSG00000028955 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000009797 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000004825 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000007733 | 6 retrocopies |
retro_tsyr_1027, retro_tsyr_1435, retro_tsyr_1634, retro_tsyr_1757, retro_tsyr_524 , retro_tsyr_968,
|