Parental gene:

Ccdc115, ENSMUSG00000042111

Aliases:Ccdc115, 2310061I09Rik, Ccp1
Description:coiled-coil domain containing 115 [Source:MGI Symbol;Acc:MGI:1916918]
Organism:Mouse (Mus musculus)
Coordinates:1:34436670..34439672(-)


>ENSMUSG00000042111
ATGGCGGTCCAGGCTCTGCGAGAGGAGTTGGACTCCAAGTGCCTACAGCTGCTCAGTGACCTGGAGGAACTGGAGGCGAA
GCGGGCGGCGCTGAACGCCAGGGTGGAGGAGGGTTGGCTCTCACTTGCCAAGGCTCGCTATGCCATGGGAGCCAAGTCGG
TAGGACCCCTGCAGTATGCCTCGCGTATGGAGCCTCAGGTCTGCGTGCGTGCCAGCGAGGCCCAGGATGGACCCCAGACC
TTCAGGGTGATCAAAGCTGACGCCCAGACCCCCGAGGAAGTGGGGCCTAGCGAAGCATCTCTGCGCAGGCGCAAGGGCCC
CACCAAGACCAAAGAGTTAGGATCTGCTGTAGTTCCTCAAGATCCCTTGAACTGGTTTGGAATTTTGGTTCCTCACAGTC
TGCGGCAGGCCCAAGCCAGCTTCCGGGATGGCCTACAGCTGGCTGCAGATATAGCCAGTCTCCAGACTCGCATCAACTGG
GGTCAGAGTCAGCTTCGAGGCCTCCAGAAAAAACTGAAGGAGTTGGACCCTGGGCCTGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 9 .91 RPM
SRP007412_cerebellum 9 .99 RPM
SRP007412_heart 11 .77 RPM
SRP007412_kidney 10 .72 RPM
SRP007412_liver 7 .02 RPM
SRP007412_testis 10 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Monodelphis domestica ENSMODG00000010588 ortholog_one2many 2 retrogenes
retro_mdom_200, retro_mdom_435,
Oryctolagus cuniculus ENSOCUG00000005099 ortholog_one2one 1 retrogene
retro_ocun_1651,
Otolemur garnettii ENSOGAG00000000166 ortholog_one2one 2 retrogenes
retro_ogar_2849, retro_ogar_3466,
Tursiops truncatus ENSTTRG00000012598 ortholog_one2one 1 retrogene
retro_ttru_781,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_380 73.84 92.78
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2. retro_mmus_2696 98.77 90.00
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Download FASTA sequences of all ENSMUSG00000042111 retrocopies