Parental gene:

Rps23, ENSMUSG00000049517

Aliases:None
Description:ribosomal protein S23 [Source:MGI Symbol;Acc:MGI:1913725]
Organism:Mouse (Mus musculus)
Coordinates:13:90923130..90924942(+)


>ENSMUSG00000049517
ATGGGCAAGTGTCGTGGTCTCCGAACTGCCCGGAAGCTCCGCAGTCACCGACGGGACCAGAAGTGGCATGACAAACAGTA
CAAGAAAGCCCACTTGGGCACAGCCCTGAAGGCCAATCCGTTTGGGGGTGCCTCTCATGCAAAGGGAATTGTGCTGGAAA
AAGTAGGGGTTGAGGCCAAACAGCCAAATTCTGCCATCAGGAAGTGCGTCAGGGTGCAGCTCATTAAGAACGGGAAGAAG
ATCACAGCGTTCGTGCCCAATGATGGCTGCCTGAACTTCATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCG
AAAAGGTCATGCTGTAGGTGATATTCCTGGAGTCCGCTTTAAGGTGGTTAAAGTAGCCAATGTTTCTCTGTTGGCTCTAT
ACAAAGGCAAGAAAGAAAGGCCAAGATCATAA

Library Parental gene expression (RPM)
SRP007412_brain 40 .46 RPM
SRP007412_cerebellum 22 .32 RPM
SRP007412_heart 60 .70 RPM
SRP007412_kidney 58 .10 RPM
SRP007412_liver 55 .65 RPM
SRP007412_testis 38 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011136 ortholog_one2one 1 retrogene
retro_acar_85,
Bos taurus ENSBTAG00000013358 possible_ortholog 3 retrogenes
retro_btau_173, retro_btau_205, retro_btau_80,
Callithrix jacchus ENSCJAG00000011247 possible_ortholog 2 retrogenes
retro_cjac_126, retro_cjac_256,
Macaca mulatta ENSMMUG00000003578 possible_ortholog 4 retrogenes
retro_mmul_1239, retro_mmul_1974, retro_mmul_2305, retro_mmul_852,
Pongo abelii ENSPPYG00000015608 ortholog_one2one 7 retrogenes
retro_pabe_1538, retro_pabe_1585, retro_pabe_19, retro_pabe_2515, retro_pabe_2567, retro_pabe_2716, retro_pabe_3129,
Rattus norvegicus ENSRNOG00000016580 ortholog_one2one 12 retrogenes
retro_rnor_100, retro_rnor_1394, retro_rnor_149, retro_rnor_1691, retro_rnor_1941, retro_rnor_1959, retro_rnor_1982, retro_rnor_2119, retro_rnor_2182, retro_rnor_2492, retro_rnor_525, retro_rnor_559,
Sarcophilus harrisii ENSSHAG00000008347 ortholog_one2one 2 retrogenes
retro_shar_257, retro_shar_348,
Tursiops truncatus ENSTTRG00000014491 ortholog_one2one 6 retrogenes
retro_ttru_1253, retro_ttru_1555, retro_ttru_186, retro_ttru_458, retro_ttru_487, retro_ttru_578,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_323 97.22 100.00
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2. retro_mmus_365 95.80 100.00
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3. retro_mmus_836 96.40 76.22
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4. retro_mmus_848 97.92 100.00
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5. retro_mmus_2151 100.00 100.00
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6. retro_mmus_2200 83.10 99.30
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7. retro_mmus_2690 90.55 88.81
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8. retro_mmus_2812 77.93 100.00
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9. retro_mmus_3118 98.60 100.00
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10. retro_mmus_3163 93.79 100.00
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11. retro_mmus_3168 99.30 100.00
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12. retro_mmus_3619 96.50 100.00
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Download FASTA sequences of all ENSMUSG00000049517 retrocopies