Parental gene:

U2af1l4, ENSMUSG00000078765

Aliases:U2af1l4, AA407033, AF419339, AI451269, AW553050, U2af26
Description:U2 small nuclear RNA auxiliary factor 1-like 4 [Source:MGI Symbol;Acc:MGI:2678374]
Organism:Mouse (Mus musculus)
Coordinates:7:30563300..30567960(+)


>ENSMUSG00000078765
ATGGCTGAATATTTAGCTTCGATATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTTTTACTTTAAGATTGGAGCCTG
CCGGCACGGGGACCGGTGCTCCCGACTTCACAACAAACCGACTTTCAGCCAGACCATAGTCCTGCTCAACTTGTACCGGA
ATCCACAGAACACAGCCCAAACTGCAGATGGATCACACTGTCACGTGAGCGACGTGGAGGTGCAAGAACACTATGATAAC
TTCTTTGAGGAGGTATTCACAGAACTGCAGGAGAAGTATGGAGAGATTGAAGAGATGAATGTGTGTGACAACCTCGGGGA
CCACCTCGTGGGCAATGTCTACGTTAAGTTCCGGCGGGAGGAGGATGCAGAGCGGGCTGTAGCGGAACTCAATAACCGCT
GGTTCAACGGGCAGGCTGTGCATGCCGAGCTGTCTCCTGTCACTGACTTCCGAGAGTCCTGCTGCCGGCAGTATGAGATG
GGGGAATGCACCCGAGGTGGCTTCTGCAACTTTATGCACCTACGGCCCATATCTCGGAACTTGCGCCGGCAGCTCTATGG
GCGAGGACCCAGGCATAGGTCACCTCCAAGGTCCCACACAGGTCACCGTCCCCGAGAAAGGAACCGACGTCGTTCCCCAG
ACCACCGGCATGGTCGCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 16 .77 RPM
SRP007412_cerebellum 31 .26 RPM
SRP007412_heart 23 .44 RPM
SRP007412_kidney 17 .57 RPM
SRP007412_liver 11 .01 RPM
SRP007412_testis 16 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000006383 ortholog_one2one 1 retrogene
retro_fcat_1650,
Gorilla gorilla ENSGGOG00000016828 ortholog_one2one 1 retrogene
retro_ggor_150,
Loxodonta africana ENSLAFG00000012923 ortholog_one2one 1 retrogene
retro_lafr_1090,
Mus musculus ENSMUSG00000031370 within_species_paralog 1 retrogene
retro_mmus_233,
Mus musculus ENSMUSG00000061613 within_species_paralog 3 retrogenes
retro_mmus_1602, retro_mmus_1787, retro_mmus_2955,
Oryctolagus cuniculus ENSOCUG00000013434 ortholog_one2one 1 retrogene
retro_ocun_1184,
Sus scrofa ENSSSCG00000002896 ortholog_one2one 1 retrogene
retro_sscr_543,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_540 80.77 82.73
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Download FASTA sequences of all ENSMUSG00000078765 retrocopies