Parental gene:

TRAPPC6B, ENSOCUG00000002171

Aliases:None
Description:trafficking protein particle complex 6B [Source:HGNC Symbol;Acc:23066]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:17:58752188..58776510(-)


>ENSOCUG00000002171
ATGTTCCTGCCTTCTCAGGGCTGGCCGCTCTCCCCGCCCCCAATTCACCCTGACTTGCTGGCTGCCTCTCCGAGCCCGCA
GTTCCCGTCCGCTTCCTACCTCACGTCATTGGGATCTCGCCCGGAAAATGGACGGTGTATAACTAAGCTGGAAAACATGG
GGTTTCGAGTAGGACAAGGATTGATAGAAAGGTTTACAAAAGATACCGCGAGATTCAAGGATGAGTTAGACATCATGAAG
TTCATTTGTAAAGATTTTTGGACTACAGTATTCAAGAAACAAATTGACAATTTAAGGACAAATCATCAGGGCATCTATGT
GCTTCAGGACAACAAATTTCGTTTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTGGAACACGCATCCAAGTATTTAG
CATTTACATGTGGTTTAATCAGAGGTGGCTTGTCAAACTTGGGGATAAAAAGTATTGTAACAGCTGAAGTGTCTTCAATG
CCTGCCTGCAAATTTCAGGTGATGATACAGAAGCTGTAG

Library Parental gene expression (RPM)
SRP017611_brain 16 .17 RPM
SRP017611_kidney 11 .96 RPM
SRP017611_liver 6 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000013828 ortholog_one2one 1 retrogene
retro_etel_1104,
Myotis lucifugus ENSMLUG00000002627 ortholog_one2one 2 retrogenes
retro_mluc_1179, retro_mluc_663,
Mus musculus ENSMUSG00000020993 ortholog_one2one 2 retrogenes
retro_mmus_1734, retro_mmus_2069,
Sarcophilus harrisii ENSSHAG00000001400 ortholog_one2one 1 retrogene
retro_shar_235,
Ictidomys tridecemlineatus ENSSTOG00000002897 ortholog_one2one 2 retrogenes
retro_itri_476, retro_itri_795,
Tupaia belangeri ENSTBEG00000003331 ortholog_one2one 1 retrogene
retro_tbel_4529,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_813 77.68 69.62
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Download FASTA sequences of all ENSOCUG00000002171 retrocopies