Parental gene:

EAPP, ENSOCUG00000003226

Aliases:None
Description:E2F-associated phosphoprotein [Source:HGNC Symbol;Acc:19312]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:17:54306190..54325084(-)


>ENSOCUG00000003226
ACTAGTTCTGAAGATGAAGTGGATGTGCTTTTACATGGAACTCCAGACCAAAAACGAAAACTCATCAGAGAATGTCTTAC
TGGTGAAAGTGAATCATCTAGTGAAGATGAATTTGAAAAAGAAATGGAAGCTGAATTAAATTCTACCATACAAACAATGG
AGGACAAGTTGTCCTCTCTGGGAACAGGGTCTTCCTCGGAAAATGGGAAAGTTGGAACGGTTCTGACAAAGTATTATGAT
GACATATATTTTGATTCTGATTCTGAGGATGAAGACAAAGCAGCACAGGTGACCAAGAAGAAAAAGAAGAAACAACACAG
GATTCCAACAAATGATGAATTACTGTATGATCCTGAAAAAGATAACAGAGACCAGGCCTGGGTTGATGCACAAAGAAGGG
GTTATCACGGTTTTGGACTACAGAGACCACGCCAGCAACAACAGCCAGTTCCAAATAGTGATGCTGTTTTGAATTGCCCT
GCCTGCATGACCACCCTGTGCCTTGATTGCCAGAGGCATGAATCTTACAAAACTCAATATAGAGCAATGTTTGTGATGAA
TTGTTCAGTCAACAAAGAGGAGGTTCTAAGATACAAAGCTCCAGAGAACAGGAAGAAAAGGCGGGGCCATAAGAAGATGA
GGTCTACCCATGAAGATGCTGCAGAGCAAGTGGAGGCAGGAGTGGAAGAAATCTATCACCCAGTCATGTGCACCGAATGT
TCCACTGAGGTGGCAGTCTACGACAAGGACGAAGTCTTTCATTTTTTCAACGTTTTAGCAAGCCATTCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 26 .77 RPM
SRP017611_kidney 34 .66 RPM
SRP017611_liver 15 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005391 ortholog_one2many 1 retrogene
retro_cjac_3231,
Cavia porcellus ENSCPOG00000003005 ortholog_one2one 1 retrogene
retro_cpor_898,
Myotis lucifugus ENSMLUG00000013814 ortholog_one2one 1 retrogene
retro_mluc_596,
Monodelphis domestica ENSMODG00000014525 ortholog_one2one 1 retrogene
retro_mdom_1226,
Mustela putorius furo ENSMPUG00000001029 ortholog_one2many 1 retrogene
retro_mputfur_19,
Ictidomys tridecemlineatus ENSSTOG00000005273 ortholog_one2one 2 retrogenes
retro_itri_1598, retro_itri_237,
Tupaia belangeri ENSTBEG00000001306 ortholog_one2one 1 retrogene
retro_tbel_4258,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1701 76.85 76.05
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Download FASTA sequences of all ENSOCUG00000003226 retrocopies