Parental gene:

ENSOCUG00000005420

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:16:38941217..38945320(-)


>ENSOCUG00000005420
ATGCATCGAACAACCAGAATCAAGATCACTGAGCTAAATCCCCACCTAATGTGTGTGCTTTGTGGAGGATACTTCATTGA
TGCCACCACCATAATAGAATGTCTACATTCCTTCTGTAAAACATGTATTGTGCGTTACCTGGAGACCAGCAAGTATTGCC
CTATTTGTGATGTTCAAGTTCACAAAACCAGGCCACTGCTGAATATAAGGTCAGATAAAACTCTTCAAGATATCGTATAC
AAATTAGTTCCAGGGCTTTTCAAAAATGAAATGAAGAGAAGAAGGGATTTTTATGCAGCTCATCCTTCAGCTGATGCTGC
CAATGGCTCTAATGAAGATAGAGGAGAAGTTGCAGATGAAGATAAGAGAATTATAACTGATGATGAAATAATAAGTTTAT
CCATTGAATTCTTTGACCAGAACAGATTGGATCGGAAAGTAAGCAAAGACAAAGAGAAATCTAAGGAGGAGGTGAATGAT
AAAAGATATTTACGATGCCCAGCAGCAATGACTGTGATGCACTTAAGAAAGTTTCTCAGAAGTAAAATGGACATACCTAA
CACTTTCCAGATTGATGTCATGTATGAAGAGGAGCCCTTGAAGGATTACTATACACTAATGGATATTGCCTACATTTATA
CCTGGAGAAGGAATGGTCCACTTCCTTTGAAATACAGAGTTCGACCTACTTGTAAGAGGATGAAGATCAGTCATCAGAGA
GATGGACTGACAAATGCTGGAGAACTGGAAAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGCAGGAGGTATTCCCTC
CACCTCTTCTTGTTTGCCTAGCCCCACTACTCCAGTGCAGTCTCCTCATCCACAGTTTCCTCACATTTCTAGTACTATGA
ATGGAACCAGCAACAGCCCCAGCGGTAACCACCAATCTTCTTTTGCCAATAGACCTCGAAAATCATCAGTAAATGGGTCG
TCAGCAACTTCATCTGGTTGA

Library Parental gene expression (RPM)
SRP017611_brain 20 .47 RPM
SRP017611_kidney 21 .79 RPM
SRP017611_liver 2 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011962 ortholog_one2one 1 retrogene
retro_chof_709,
Callithrix jacchus ENSCJAG00000036548 ortholog_one2one 1 retrogene
retro_cjac_2437,
Cavia porcellus ENSCPOG00000015427 ortholog_one2one 2 retrogenes
retro_cpor_1209, retro_cpor_546,
Gorilla gorilla ENSGGOG00000025243 ortholog_one2one 1 retrogene
retro_ggor_3025,
Loxodonta africana ENSLAFG00000016845 ortholog_one2one 1 retrogene
retro_lafr_591,
Macaca mulatta ENSMMUG00000000881 ortholog_one2one 1 retrogene
retro_mmul_2591,
Mus musculus ENSMUSG00000026739 ortholog_one2one 1 retrogene
retro_mmus_3710,
Tupaia belangeri ENSTBEG00000015631 ortholog_one2one 1 retrogene
retro_tbel_2369,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_489 93.37 60.12
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Download FASTA sequences of all ENSOCUG00000005420 retrocopies