Parental gene: | PPIL4, ENSOCUG00000007696 |
| Aliases: | None |
| Description: | peptidylprolyl isomerase (cyclophilin)-like 4 [Source:HGNC Symbol;Acc:15702] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018800:351358..399556(+) |
>ENSOCUG00000007696
ATGGCGGTTCTGCTGGAGACCACTCTGGGCGACGTCGTCATCGACCTGTACACCGAGGAGCGGCCGCGCGCCTGTTTGAA
TTTCTTGAAGTTGTGCAAAATAAAATATTATAATTATTGCCTTATTCACAATGTACAGAGGGATTTTATCATACAAACTG
GTGATCCTACAGGCACTGGTCGTGGAGGAGAGTCTATTTTTGGTCAACTGTACGGTGATCAAGCAAGCTTTTTTGAGGCG
GAAAAAGTGCCAAGAATTAAACACAAGAAGAAAGGCACTGTGTCCATGGTGAACAATGGCAGTGATCAGCATGGATCTCA
GTTTCTTATTACTACAGGAGAAAATCTGGATTACCTTGATGGTGTTCATACAGTGTTTGGCGAGGTGACGGAAGGCATGG
ACATAGTTAAGAAAATTAATGAGACCTTTGTTGACAAGGACTTTGTACCATATCAAGATATCAGGATAAATCATACAGTG
ATTTTAGATGATCCATTTGATGACCCTCCTGATTTATTAATTCCTGATCGATCACCAGAACCCACAAGGGAACAATTAGA
TAGTGGCCGAATAGGAGCAGATGAAGAAATTGATGATTTTAAAGGAAGATCAGCTGAAGAAGTAGAAGAAATAAAGGCAG
AAAAAGAAGCCAAAACTCAAGCTATTCTTCTAGAGATGGTGGGAGACCTACCTGATGCAGATATTAAACCTCCAGAAAAT
GTGCTCTTTGTTTGTAAATTGAATCCAGTGACCACAGATGAGGATCTGGAAATAATATTCTCAAGATTTGGGCCAATAAG
AAGTTGTGAGGTTATCCGGGATTGGAAGACAGGAGAGTCCCTCTGTTATGCTTTTATTGAATTTGAAAAGGAAGAAGATT
GTGAGAAAGCGTTCTTTAAAATGGACAATGTACTTATAGATGACAGAAGAATACACGTGGATTTTAGCCAGTCTGTTGCA
AAGGTTAAGTGGAAAGGAAAGGGTGGGAAATACACTAAGAGTGATTTCAAGGAGTATGAAAAGGAACAGGATAAACGCTC
TAATTTGGTCCTGAAAGATAAAGTAAAACCCAAACAGGATGCAAAATACGATCTAATCCTAGATGAGGAGGCAGAAGACT
CAAAGTCCAGTCACTCACACACCAGTAAAAAACACAAGAAGAAAACCCGACACTGCTCTGAAGAGAAGGAAGATGAGGAC
TACATGCCGGTCAAAAATACTAACCAGGATATCTACAGGGAGATGGGGTTTGGTCACTATGAAGAAGAAGAAAGCTGTTG
GGAGAAACAAAAGAATGAAAAGAGAGACCGAACTCAGAACCGAAGTCGCAGCCGATCTCGAGAAAGGGATGGCGACTATA
GCAATAGTCACAAGTCCAAGTACCACACTGACTCTTACGAAAGAGAGAGGGGTAAGAGGAGAGGCCGGAGCAGAAGTCCA
AAGAAATCTAAAGAAAAATCTAAGTACAGA
ATGGCGGTTCTGCTGGAGACCACTCTGGGCGACGTCGTCATCGACCTGTACACCGAGGAGCGGCCGCGCGCCTGTTTGAA
TTTCTTGAAGTTGTGCAAAATAAAATATTATAATTATTGCCTTATTCACAATGTACAGAGGGATTTTATCATACAAACTG
GTGATCCTACAGGCACTGGTCGTGGAGGAGAGTCTATTTTTGGTCAACTGTACGGTGATCAAGCAAGCTTTTTTGAGGCG
GAAAAAGTGCCAAGAATTAAACACAAGAAGAAAGGCACTGTGTCCATGGTGAACAATGGCAGTGATCAGCATGGATCTCA
GTTTCTTATTACTACAGGAGAAAATCTGGATTACCTTGATGGTGTTCATACAGTGTTTGGCGAGGTGACGGAAGGCATGG
ACATAGTTAAGAAAATTAATGAGACCTTTGTTGACAAGGACTTTGTACCATATCAAGATATCAGGATAAATCATACAGTG
ATTTTAGATGATCCATTTGATGACCCTCCTGATTTATTAATTCCTGATCGATCACCAGAACCCACAAGGGAACAATTAGA
TAGTGGCCGAATAGGAGCAGATGAAGAAATTGATGATTTTAAAGGAAGATCAGCTGAAGAAGTAGAAGAAATAAAGGCAG
AAAAAGAAGCCAAAACTCAAGCTATTCTTCTAGAGATGGTGGGAGACCTACCTGATGCAGATATTAAACCTCCAGAAAAT
GTGCTCTTTGTTTGTAAATTGAATCCAGTGACCACAGATGAGGATCTGGAAATAATATTCTCAAGATTTGGGCCAATAAG
AAGTTGTGAGGTTATCCGGGATTGGAAGACAGGAGAGTCCCTCTGTTATGCTTTTATTGAATTTGAAAAGGAAGAAGATT
GTGAGAAAGCGTTCTTTAAAATGGACAATGTACTTATAGATGACAGAAGAATACACGTGGATTTTAGCCAGTCTGTTGCA
AAGGTTAAGTGGAAAGGAAAGGGTGGGAAATACACTAAGAGTGATTTCAAGGAGTATGAAAAGGAACAGGATAAACGCTC
TAATTTGGTCCTGAAAGATAAAGTAAAACCCAAACAGGATGCAAAATACGATCTAATCCTAGATGAGGAGGCAGAAGACT
CAAAGTCCAGTCACTCACACACCAGTAAAAAACACAAGAAGAAAACCCGACACTGCTCTGAAGAGAAGGAAGATGAGGAC
TACATGCCGGTCAAAAATACTAACCAGGATATCTACAGGGAGATGGGGTTTGGTCACTATGAAGAAGAAGAAAGCTGTTG
GGAGAAACAAAAGAATGAAAAGAGAGACCGAACTCAGAACCGAAGTCGCAGCCGATCTCGAGAAAGGGATGGCGACTATA
GCAATAGTCACAAGTCCAAGTACCACACTGACTCTTACGAAAGAGAGAGGGGTAAGAGGAGAGGCCGGAGCAGAAGTCCA
AAGAAATCTAAAGAAAAATCTAAGTACAGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .40 RPM |
| SRP017611_kidney | 12 .06 RPM |
| SRP017611_brain | 14 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019613 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023067 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015316 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007046 | other_paralog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011453 | other_paralog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012012 | other_paralog | 1 retrogene | |
| Taeniopygia guttata | ENSTGUG00000010655 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_661 | 79.55 | 54.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_892 | 92.70 | 72.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000007696 retrocopies