Parental gene:

ENSOCUG00000015551

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL019077:171992..184652(+)


>ENSOCUG00000015551
ATGTTCCACGCTGCAGAGAGTGAGGCCGGACGGGCAAGCTCTAGGGCCATGAAGCCCCCAGGAGGAGAATCCAGCAATCT
TTTCGGAAGTGCGGAAGAAGCCGTTCCTTCGAGCAGACCTAACAGGATGGCGTCGAATATTTTTGGACCAACTGAAGAAC
CTCAGCACCTGCCCAAGAGGACCAACCCCCCAGGGGGCAAAGGAAGTGGCATCTTCGAGGAGCTGCTCTCTGTGCAGGCT
CGGCAGCGTCTGACTCGGCCAGGTGGGAAGACCAGTGACATTTTTGGGGTCTCCGGCATTGTCTTCATTGCTCCAAATGC
CCATCCTAGGAAGACAGTGGACCACATCCTCCTCCGAGAAGGAGAAGACCCGAGCCTGGACCCGAGAGCTGCAGCGGGAA
CCCCGTCCAGGGACGCGCCGCTGGAAGAGAAAGGCCGCTCCCGAGAAGCTAACCATGCCAAGGAGCCCGAGCCCACACCC
CAGGTCGACAGCCACGAGCCCCGGCTGGGGCCGCGGCCTCGCTCCCACAACAAGGTCCTGAACCCGCCGGGAGGAAAATC
CAGCATCTCCTTCTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .64 RPM
SRP017611_kidney 7 .91 RPM
SRP017611_liver 3 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008232 ortholog_one2many 1 retrogene
retro_amel_1019,
Cavia porcellus ENSCPOG00000005352 ortholog_one2many 2 retrogenes
retro_cpor_749, retro_cpor_892,
Dipodomys ordii ENSDORG00000007521 ortholog_one2many 1 retrogene
retro_dord_269,
Macropus eugenii ENSMEUG00000008873 ortholog_one2many 4 retrogenes
retro_meug_1471, retro_meug_1628, retro_meug_189, retro_meug_258,
Mus musculus ENSMUSG00000024165 ortholog_one2many 3 retrogenes
retro_mmus_1204, retro_mmus_655, retro_mmus_709,
Pteropus vampyrus ENSPVAG00000016673 ortholog_one2many 1 retrogene
retro_pvam_99,
Rattus norvegicus ENSRNOG00000024661 ortholog_many2many 2 retrogenes
retro_rnor_25, retro_rnor_560,
Sorex araneus ENSSARG00000012440 ortholog_one2many 1 retrogene
retro_sara_335,
Sarcophilus harrisii ENSSHAG00000012700 ortholog_one2many 1 retrogene
retro_shar_184,
Tursiops truncatus ENSTTRG00000011377 ortholog_one2many 1 retrogene
retro_ttru_429,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_275 86.60 100.00
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Download FASTA sequences of all ENSOCUG00000015551 retrocopies