Parental gene: | EIF2A, ENSOCUG00000016095 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 2A, 65kDa [Source:HGNC Symbol;Acc:3254] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 14:44418172..44467256(+) |
>ENSOCUG00000016095
ATGGCGCCGTCCACGCCGCTTTTGACAGTTCGAGGATCAGAAGGACTGTACATGGTAACTGGGCCACCACATTTTACAGA
AAGCACAGTGTTTCCAAGGGAATCTGGAAAGAATTGCAAAGTCTACACTTTTAGTAAGGATGGGACCTTGTTTGCCTGGT
GCAATGGAGAAAAAGTAAATATTATCAGTGTCACTAACAAGGGACAGCTGCACTCCTTCGACCTCCCAAAGACAGTTTGC
CTTGAATTCTCGCCAAAAAACACTGTTCTGGCAACGTGGCAGCCTTACACTACTTCTAAAGATGGCACAGCTGGGACACC
CAACCTTCAACTTTATGACTTGAAAACTGGGACATGTTTGAAGTCTTTCATCCAGAAAAAAATGCAAAATTGGTGTCCGT
CCTGGTCAGAAGATGAAAGTATTAGTGCCCGAAATGTGAACAATGAAGTTCACTTCTTTGAAAACAACAATTTCAACATA
ATTGCAAATAAATTACATTTACAAAAAATTAATGATTTTGTGCTATCACCTGGACCTCAGCCATACAAGGTGGCCGTCTA
TGTTCCAGGAAGCAAAGGTGCACCTTCATTTGTTAGATTGTATCAGTACCCCAACTTCGGTGGACCTCATGCAGCTTTAG
CCAATAAAAGTTTCTTTAAGGCTGATAAGGTTACAATGCTATGGAATAAAAAAGCCACTGCTGTCTTGGTAATAGCTAGT
ACAGACGTTGACAAGACAGGAGCCTCCTATTATGGGGAACAGACACTGCATTACATTGCAACAAATGGAGAAAGTGCCGT
AGTGCAACTGCCGAAAGGTGGCCCCATTTATGATGTAGCTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTGTATGGTT
TCATGCCTGCTAAAGCAACAATTTTCAACTTGAAATGTGATCCTGTGTTTGACTTTGGAACTGGTCCTCGGAATGCAGCC
TACTATAGCCCTCAAGGACATATATTAGTACTAGCTGGATTTGGAAATCTGAGAGGACAAATGGAAGTGTGGGATGTTAA
GAACTACAAGCTCATTTCTAAACCAGTGGCTTCTGATTCTACGTATTTTGCTTGGTGCCCAGATGGTGAGCATATTTTAA
CAGCCACGTGTGCTCCCAGGTTACGTGTTAATAATGGGTATAAGATTTGGCATTATACTGGCTCTGTCCTGCACAAATAT
GATGTGCCCTCAAATGGAGAGTTATGGCAGGTTTCATGGCAGCCATTTTTGGATGGAATATTTCCAGCAAAAGCAATAAC
TTACCAAGCAGTTCCAAGTGAAGTACCCAGTGAGGAACCTAAAGTTGCAACAGCTTATAGACCCCCTGCTTTAAGAAATA
AGCCAGTCACCAATTCCAAGCTGCATGAAGAAGAGCCACCTCAGAATATGAAACCACAATCAGGAAGTGATAAACCCTTA
TCAAAAACAGCCCTGAAAAATCAAAGGAAGCATGAAGCTAAGAAAGCTGCAAAGCAGGAAGCAAGAAGTGACAAAAGTCC
AGATTTGCCATCTACTCCTGCGCCACAAAGCACACCACGAAACATTACCTCTCAGTCAACTTCTGGAGACCCTGAGGTAG
ACAAAAAAATCAAGAACCTAAAGAAGAAACTGAAAGCAATTGAACAACTGAAAGAACAAGCAGCAAGTGGAAAACAGCTA
GAAAAAAATCAGTTGGAGAAAATTCAAAAAGAGACAGCCCTTCTTCAGGAACTGGAAGATTTGGAATTGGGTATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 39 .24 RPM |
| SRP017611_kidney | 42 .47 RPM |
| SRP017611_liver | 16 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001199 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014002 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000144895 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015391 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003767 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017696 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000028858 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003219 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029636 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015528 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003374 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1771 | 86.88 | 75.38 | Please wait, loading  |
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| 2. | retro_ocun_1825 | 88.04 | 75.38 | Please wait, loading |
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| 3. | retro_ocun_1861 | 87.39 | 58.46 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000016095 retrocopies