Parental gene: | C9orf41, ENSOCUG00000017017 |
| Aliases: | None |
| Description: | chromosome 9 open reading frame 41 [Source:HGNC Symbol;Acc:23435] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:61398006..61449350(-) |
>ENSOCUG00000017017
ATGAGCGCTGGCAGCCGCGGCCCGCTGTCGTACCCTCGCACGCGCACGCGCGTTTGTTCCCGGAGCCCTGAAGACCTGGC
GGAGCCCGGCGCGGATGGAGGCCTGAGGGCGGCGGGGGCGGAGCGCGCCGCGAGCTGGGGGCATGTCCGCGTCGGGCGCC
GTCTAGAGGAAGGCCAAGCAGCCGCCACCACGCTTTCACTCGCGGTGAGACGCAAGCGGGCCAGGCCGAGGGCCGCGGCG
GCGATGCAGCGACGGAGGCGCCCCCCGCCTCCTGCCTCTCAGCTGCCCGAAGGCTGCGGGGGAAGCGGCGGCGGCGGCGG
CCGCGGTGGCAGCGAGGAGGTGGAAGTGCAGTTCTCCGCCGGGCGTTTGGGCTCGGCCGCGGCGGTTTCGTCGACCGCCG
CGCGCAGCACGGAGGAAGAGGAGGAGAGGCTGGAGCGCGAGCACTTCTGGAAGATCATTAATGCCTTCCGCTACTACGGC
ACCAGTATGCATGAGCGAGTACACCGAACAGAAAGACAGTTTCGATCTCTTCCACCTAATCAACAGAAACTACTTCCTCA
GTTTGTTCTACATTTGGACAAGATCCGAAAATGCATTGATCATAATCAAGAAATACTACTGACCATTGTGAATGATTGCA
TACATATGTTTGAAAATAAAGAATATGGAGAAGATGGGAATGGAAAGATTATGCCAGCATCTACGTTTGACATGGATAAG
TTAAAATCCACATTGAAACAGTTTGTGAGAGACTGGAGTGAAACTGGGAAAGCAGAAAGGGATGCCTGCTACCAGCCAAT
CATTAAAGAAATTTTAAAAAATTTTCCCAAAGAGAGATGGGATCCTTCTAAAGTAACTATTCTGGTACCTGGTGCTGGAC
TAGGAAGACTGGCCTGGGAAATAGCTATGCTAGGTTATGCTTGTCAAGGAAATGAATGGAGTTTTTTTATGCTCTTTTCT
TCCAACTTTGTACTCAACAGATGCTCTGAAATTAATAAATACAGACTTTATCCCTGGATCCATCAGTTTAGCAATAACCG
GAGATCAGCTGATCAGATTCGACCCATCTTTTTCCCTGATGTTGACCCCCACAGTCTTCCTCCTGGTTCTAACTTTTCTA
TGACTGCAGGAGATTTTCAGGAGATTTATTCAGAATGCAATACCTGGGACTGTATTGCTACCTGTTTCTTCATAGATACA
GCTCACAATGTAATTGATTATATTGATACAATATGGAAAATACTCAAACCAGGTGGAATTTGGATAAATCTAGGGCCTCT
TTTGTACCACTTTGAAAATTTGGCAAATGAACTTTCCATAGAATTGAGCTATGAGGATATAAAGAATGTCGTTCTGCAAT
ATGGATTCCAAGTAGAGGTAAGGATGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .49 RPM |
| SRP017611_kidney | 14 .29 RPM |
| SRP017611_liver | 5 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000024726 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000000385 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_921 | 95.45 | 54.86 | Please wait, loading  |
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| 2. | retro_ocun_1659 | 59.28 | 53.37 | Please wait, loading |
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| 3. | retro_ocun_1737 | 70.49 | 52.05 | Please wait, loading |
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| 4. | retro_ocun_1827 | 54.14 | 57.02 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000017017 retrocopies