Parental gene:

GALNT13, ENSOCUG00000017645

Aliases:None
Description:UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) [Source:HGNC Symbol;Acc:23242]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:92772637..93304931(+)


>ENSOCUG00000017645
ATGAGGAGATTTGTTTACTGCAAGGTGGTTCTAGCCACTTCACTGATGTGGGTTCTTGTTGATGTCTTCTTACTGCTGTA
CTTCAGTGAATGTAACAAATGTGATGACAAGAAGGAGAGATCCCTGCTGCCTGCACTGAGGGCTGTTATTTCAAGAAACC
AAGAAGGCCCAGGAGAAATGGGAAAAGCTGTACTGATTCCTAAAGATGACCAGGAGAAAATGAAAGAACTGTTTAAAATC
AATCAGTTTAACCTTATGGCCAGTGACTTGATCGCCCTTAACAGAAGTCTGCCGGATGTAAGATTAGAAGGATGCAAGAC
AAAAGTCTACCCTGATGAACTTCCAAACACAAGTGTAGTCATTGTGTTTCATAATGAAGCTTGGAGCACTCTCCTCAGGA
CTGTTTACAGTGTTATAAACCGGTCCCCACACTACCTACTCTCTGAGGTCATCTTGGTAGATGATGCCAGTGAAAGAGAT
TTTCTCAAGTTGACATTAGAGAATTATGTGAAAAACTTAGAAGTGCCAGTAAAAATTATAAGGATGGAAGAGCGCTCTGG
GTTAATACGTGCCCGTCTTCGAGGAGCTGCGGCTTCAAAAGGGCAGGTCATAACTTTTCTTGATGCACACTGTGAGTGCA
CATTGGGATGGTTGGAGCCCTTACTGGCAAGAATAAAAGAAGACAGGAAAACTGTTGTATGCCCCATCATCGATGTCATT
AGTGATGATACCTTTGAATATATGGCTGGGTCAGATATGACTTATGGGGGTTTTAACTGGAAACTGAATTTCCGCTGGTA
TCCTGTTCCCCAGAGAGAAATGGATAGGAGAAAAGGAGACAGAACATTACCTGTCAGGACCCCTACTATGGCTGGTGGCC
TATTTTCTATTGACAGAAACTACTTTGAAGAGATAGGAACTTACGATGCAGGAATGGATATCTGGGGTGGAGAGAATCTT
GAAATGTCTTTTAGGATTTGGCAATGTGGAGGCTCACTGGAGATTGTAACTTGCTCCCATGTTGGACATGTTTTTCGGAA
GGCAACTCCATATACTTTTCCTGGTGGCACAGGCCATGTCATCAACAAGAACAATAGGAGACTGGCAGAAGTCTGGATGG
ATGAATTTAAAGATTTCTTCTATATCATATCTCCAGGTGTTGTCAAAGTGGATTATGGAGATGTGTCAGTCAGAAAAACA
CTAAGAGAAAATCTGAAGTGTAAGCCCTTTTCCTGGTACCTAGAAAACATCTACCCGGACTCCCAGATTCCAAGACGTTA
TTACTCACTTGGTGAGATAAGAAATGTTGAAACCAATCAATGTCTAGACAACATGGGCCGCAAAGAAAATGAAAAAGTGG
GCATATTCAACTGTCATGGTATGGGAGGAAATCAGGTATTTTCTTATACTGCTGACAAAGAAATCCGGACCGATGACTTG
TGCTTGGATGTTTCTAGACTCAATGGACCAGTAATCATGCTGAAATGCCACCACATGAGAGGAAATCAGTTATGGGAGTA
CGATGCTGAGAAACTCACCTTAAGACACGTTAACAGTAACCAATGTCTTGATGAACCTTCTGAAGAAGACAAAATGGTGC
CTACCATGCAGGACTGCAGTGGAAGCAGATCCCAGCAATGGCTACTGAGGAACATGACCCTGGGGGCATGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 3 .45 RPM
SRP017611_brain 66 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000013917 ortholog_one2one 1 retrogene
retro_mmur_228,
Oryctolagus cuniculus ENSOCUG00000016221 other_paralog 1 retrogene
retro_ocun_1260,
Otolemur garnettii ENSOGAG00000016208 ortholog_one2one 2 retrogenes
retro_ogar_2525, retro_ogar_3272,
Tupaia belangeri ENSTBEG00000000869 ortholog_one2one 1 retrogene
retro_tbel_1671,
Tursiops truncatus ENSTTRG00000002506 ortholog_one2one 2 retrogenes
retro_ttru_793, retro_ttru_854,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_274 85.92 86.87
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000017645 retrocopies