Parental gene: | ENSOGAG00000004441 |
| Aliases: | None |
| Description: | None |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873542.1:16622375..16635696(-) |
>ENSOGAG00000004441
TCAGGCATCATGGACAGATCAAAAGAAAACTACATTTCAGGGCCCATTAAGGCCGCGGTTCCACTTGATGGTCCAAAACG
CGTTCCAGTGACCCAGCAGTTTTCCGGTCAGAATCCATTACCTGCAAGTAGTGGACAGGCTCCGTGGGTCCTGTGCCCTT
CAAATTCCTCCCAGCGCATTCCTTCTCAAGCACAAAAGCTTATCTCCAGCCACAAACCAGTTCAGAATCACACGCAGAAG
CAATTACAGGCAACCAGCATACCTCATCCTGTCTCTAAGCCACTGAATGACACCCAGAAGAGCAAGCAGCTCCAGCCAGC
AGCACCTGGAAATAATCGTGAGGAAGAAGTGACATCAAAACAGAAAAACGAAGAATCAAAAAAAAGGCAATGGGCTTTGG
AAGATTTTGAAATTGGCCGCCCTCTGGGTAAAGGAAAATTTGGTAATGTTTATTTGGCAAGAGAAAAACAAAGCAAGTTT
ATCCTGGCTCTTAAAGTGCTGTTTAAAGCTCAGCTGGAAAAAGCAGGAGTGGAGCATCAACTCAGAAGAGAAGTGGAAAT
CCAGTCCCATCTTCGGCATCCTAATATTCTCAGACTGTATGGTTATTTCCATGATGCCACCAGAGTTTACCTAATTCTAG
AATATGCGCCACTTGGAACCGTCTATAGAGAACTGCAGAAACTTGCAAAGTTTGATGAGCAGAGAACTGCTACTTATATC
ACTGAACTGGCAAATGCCCTGTCTTACTGCCACTCAAAGAGAGTTATTCATAGAGACATTAAGCCAGAGAACCTGCTGCT
GGGATCATCTGGAGAGCTTAAGATTGCAGATTTTGGTTGGTCCGTTCATGCTCCGTCCTCCAGGAGAACCACTCTCTGTG
GTACCCTGGACTACCTGCCCCCTGAGATGATTGAAGGGCGGATGCATGATGAGAAGGTAGACCTCTGGAGCCTGGGAGTT
CTTTGCTATGAATTTTTAGTTGGGAAACCTCCTTTTGAGGCAAACACATACCAAGAGACCTACAGAAGAATATCACGGAT
TGAATTCACGTTTCCTGAGTTTGTAACAGAGGGAGCTAGAGACCTTATTTCAAGACTGTTGAAGCATAATCCAAGCCAGA
GGCTGACTCTCAGAGAAGTACTTGAACACCCCTGGATCAAAGCAAATTCATCAAAACCATCAAGTAGCCAAAACAAAGAA
TCAAATAGCAAACAGTCTTAG
TCAGGCATCATGGACAGATCAAAAGAAAACTACATTTCAGGGCCCATTAAGGCCGCGGTTCCACTTGATGGTCCAAAACG
CGTTCCAGTGACCCAGCAGTTTTCCGGTCAGAATCCATTACCTGCAAGTAGTGGACAGGCTCCGTGGGTCCTGTGCCCTT
CAAATTCCTCCCAGCGCATTCCTTCTCAAGCACAAAAGCTTATCTCCAGCCACAAACCAGTTCAGAATCACACGCAGAAG
CAATTACAGGCAACCAGCATACCTCATCCTGTCTCTAAGCCACTGAATGACACCCAGAAGAGCAAGCAGCTCCAGCCAGC
AGCACCTGGAAATAATCGTGAGGAAGAAGTGACATCAAAACAGAAAAACGAAGAATCAAAAAAAAGGCAATGGGCTTTGG
AAGATTTTGAAATTGGCCGCCCTCTGGGTAAAGGAAAATTTGGTAATGTTTATTTGGCAAGAGAAAAACAAAGCAAGTTT
ATCCTGGCTCTTAAAGTGCTGTTTAAAGCTCAGCTGGAAAAAGCAGGAGTGGAGCATCAACTCAGAAGAGAAGTGGAAAT
CCAGTCCCATCTTCGGCATCCTAATATTCTCAGACTGTATGGTTATTTCCATGATGCCACCAGAGTTTACCTAATTCTAG
AATATGCGCCACTTGGAACCGTCTATAGAGAACTGCAGAAACTTGCAAAGTTTGATGAGCAGAGAACTGCTACTTATATC
ACTGAACTGGCAAATGCCCTGTCTTACTGCCACTCAAAGAGAGTTATTCATAGAGACATTAAGCCAGAGAACCTGCTGCT
GGGATCATCTGGAGAGCTTAAGATTGCAGATTTTGGTTGGTCCGTTCATGCTCCGTCCTCCAGGAGAACCACTCTCTGTG
GTACCCTGGACTACCTGCCCCCTGAGATGATTGAAGGGCGGATGCATGATGAGAAGGTAGACCTCTGGAGCCTGGGAGTT
CTTTGCTATGAATTTTTAGTTGGGAAACCTCCTTTTGAGGCAAACACATACCAAGAGACCTACAGAAGAATATCACGGAT
TGAATTCACGTTTCCTGAGTTTGTAACAGAGGGAGCTAGAGACCTTATTTCAAGACTGTTGAAGCATAATCCAAGCCAGA
GGCTGACTCTCAGAGAAGTACTTGAACACCCCTGGATCAAAGCAAATTCATCAAAACCATCAAGTAGCCAAAACAAAGAA
TCAAATAGCAAACAGTCTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000029331 | ortholog_one2many | 3 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005976 | ortholog_one2many | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000006633 | ortholog_many2many | 1 retrogene | |
| Felis catus | ENSFCAG00000024493 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000087586 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007197 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007925 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000070 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000027496 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007029 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000999 | within_species_paralog | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000011148 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013646 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004479 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000007493 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011958 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013284 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009221 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_980 | 92.27 | 53.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_2805 | 84.98 | 99.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_3440 | 93.75 | 63.05 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000004441 retrocopies