Parental gene: | DDX18, ENSOPRG00000001701 |
| Aliases: | None |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_597:81716..96829(+) |
>ENSOPRG00000001701
ATGTCTCACCTGCCGATGAAGCTGCTGCGGAGGAAGATCGAGAAGCGCAACTTCAAGCTGCGGCAGCGGAACCTCAAGCT
GCAGGGGGCCTCGGATGTGAGCCTGTCAGAGGATCAGAATGGAGACGTGCCTGAAGAGGCCATGGCCAGGGGAAAGCCCA
CGAAGGCCCCGAAACCGTCCATGAGTGCCGGCTTGTCGGAGGCGCAAAATGGAGCCCCGCCTGAAGACGTGGTGGAAGTC
AAAGTTAAACAATCCACCCAGAAACCCGCAGCACTAACCAATGGCGAAGCGGCAACAGAGTTGCCCAATCCCGAATCACG
GAAGAAGAAAAAGAAGAAGAAGAGAAAGCTGGTGAATGATGCTGGGCCTGATGCAAAAAAAGCAAAGGTTGAAGGCAGCG
ACACCGAGGCCCCTAAAGAAGCGGCATCCAGTGTGGCGGCGGCAGACAACGAGGAGGAGGACAGTGAAGTCCCCAGCCTG
CCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCGTTTGAATCTCTAAGTAATCTCGTCAATGAAAACACTCTGAAGGC
AATAAAAGAAATGGGCTTCACAAACATGACTGAAATTCAACATAAAAGTGTCAGACCCCTTCTGGAAGGCAGAGATCTTC
TAGCAGCTGCAAAGACAGGGAGCGGCAAAACCCTGGCATTTCTCATCCCTGCGGTTGAACTGATTGTGAAGTTAAAGTTC
ATGCCCAGGAACGGAACAGGAGTCCTGATTCTGTCCCCGACTAGAGAGCTGGCCATGCAGACATTTGGCGTTCTGAAGGA
GCTGATGACCCACCATGTGCACACGTACGGCCTGATAATGGGGGGCAGCAACAGGTCCGCCGAAGCACAGAAACTTGCCA
ACGGGATCAACATCATTGTGGCCACCCCCGGCCGGCTGCTGGACCACATGCAGAACACCCCAGGGTTTATGTATAAGAAC
CTGCAGTGTTTGGTGATTGATGAGGCTGATCGCATCCTGGATGTTGGATTTGAAGAGGAATTGAAGCAAATTATTAAACT
TTTGCCAACCCGCAGGCAGACCATGCTCTTCTCTGCCACGCAAACTCGGAAAGTGGAGGACCTGGCGAGGATTTCTCTGA
AGAAGGAGCCGTTGTACGTCGGCGTCGATGACGACAAAGCCAACGCCACGGTGGACGGCCTCGAGCAGGGATATGTTGTT
TGTCCCTCAGAAAAGAGATTCCTACTGCTCTTCACATTCCTTAAGAAGAACCGAAAGAAGAAACTCATGGTCTTCTTCTC
CTCCTGCATGTCCGTGAAATACCACTACGAGCTGCTGAACTACATCGACCTGCCCGTGCTGGCCATCCACGGAAAGCAGA
AGCAGAACAAGCGGACAACCACGTTCTTCCAGTTCTGCAACGCAGACTCGGGGATATTGCTGTGTACAGATGTGGCCGCA
AGGGGGCTGGATATTCCTGAAGTGGACTGGATTGTCCAGTACGACCCTCCGGATGACCCTAAGGAATATATTCACCGTGT
AGGCAGAACAGCTCGGGGTCTGAACGGACGAGGGCACGCTCTGCTCATTTTGCGTCCAGAAGAACTGGGTTTCCTTCGTT
ACTTAAAGCAATCCAAGGTTCCATTAAGTGAATTCGACTTCTCCTGGTCTAAAATCTCCAACATTCAGTCTCAGCTTGAG
AAACTGATCGAGAAGAATTACTTCCTCCACAAGTCAGCCCAGGAAGCCTATAAGTCATACATACGCGCTTATGATTCCCA
TTCTCTGAAGCAGATCTTCAATGTCAATAACTTAAATTTGCCTCAGGTGGCACTGTCTTTCGGCTTCAAGGTGCCTCCTT
TTGTGGATCTGAATGTGAACAGCAACGATGGCAAGGTTCGAAAGAGAGGAGGCGGCGGGGGATTCGGCTACCAGAAAACC
AAGAAGGTTGAGAAATCCATCATCTTCAAGCACATCAGCAAGAAGCCGTCCGACCGCAGGCAGTTCTCTCACTGA
ATGTCTCACCTGCCGATGAAGCTGCTGCGGAGGAAGATCGAGAAGCGCAACTTCAAGCTGCGGCAGCGGAACCTCAAGCT
GCAGGGGGCCTCGGATGTGAGCCTGTCAGAGGATCAGAATGGAGACGTGCCTGAAGAGGCCATGGCCAGGGGAAAGCCCA
CGAAGGCCCCGAAACCGTCCATGAGTGCCGGCTTGTCGGAGGCGCAAAATGGAGCCCCGCCTGAAGACGTGGTGGAAGTC
AAAGTTAAACAATCCACCCAGAAACCCGCAGCACTAACCAATGGCGAAGCGGCAACAGAGTTGCCCAATCCCGAATCACG
GAAGAAGAAAAAGAAGAAGAAGAGAAAGCTGGTGAATGATGCTGGGCCTGATGCAAAAAAAGCAAAGGTTGAAGGCAGCG
ACACCGAGGCCCCTAAAGAAGCGGCATCCAGTGTGGCGGCGGCAGACAACGAGGAGGAGGACAGTGAAGTCCCCAGCCTG
CCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCGTTTGAATCTCTAAGTAATCTCGTCAATGAAAACACTCTGAAGGC
AATAAAAGAAATGGGCTTCACAAACATGACTGAAATTCAACATAAAAGTGTCAGACCCCTTCTGGAAGGCAGAGATCTTC
TAGCAGCTGCAAAGACAGGGAGCGGCAAAACCCTGGCATTTCTCATCCCTGCGGTTGAACTGATTGTGAAGTTAAAGTTC
ATGCCCAGGAACGGAACAGGAGTCCTGATTCTGTCCCCGACTAGAGAGCTGGCCATGCAGACATTTGGCGTTCTGAAGGA
GCTGATGACCCACCATGTGCACACGTACGGCCTGATAATGGGGGGCAGCAACAGGTCCGCCGAAGCACAGAAACTTGCCA
ACGGGATCAACATCATTGTGGCCACCCCCGGCCGGCTGCTGGACCACATGCAGAACACCCCAGGGTTTATGTATAAGAAC
CTGCAGTGTTTGGTGATTGATGAGGCTGATCGCATCCTGGATGTTGGATTTGAAGAGGAATTGAAGCAAATTATTAAACT
TTTGCCAACCCGCAGGCAGACCATGCTCTTCTCTGCCACGCAAACTCGGAAAGTGGAGGACCTGGCGAGGATTTCTCTGA
AGAAGGAGCCGTTGTACGTCGGCGTCGATGACGACAAAGCCAACGCCACGGTGGACGGCCTCGAGCAGGGATATGTTGTT
TGTCCCTCAGAAAAGAGATTCCTACTGCTCTTCACATTCCTTAAGAAGAACCGAAAGAAGAAACTCATGGTCTTCTTCTC
CTCCTGCATGTCCGTGAAATACCACTACGAGCTGCTGAACTACATCGACCTGCCCGTGCTGGCCATCCACGGAAAGCAGA
AGCAGAACAAGCGGACAACCACGTTCTTCCAGTTCTGCAACGCAGACTCGGGGATATTGCTGTGTACAGATGTGGCCGCA
AGGGGGCTGGATATTCCTGAAGTGGACTGGATTGTCCAGTACGACCCTCCGGATGACCCTAAGGAATATATTCACCGTGT
AGGCAGAACAGCTCGGGGTCTGAACGGACGAGGGCACGCTCTGCTCATTTTGCGTCCAGAAGAACTGGGTTTCCTTCGTT
ACTTAAAGCAATCCAAGGTTCCATTAAGTGAATTCGACTTCTCCTGGTCTAAAATCTCCAACATTCAGTCTCAGCTTGAG
AAACTGATCGAGAAGAATTACTTCCTCCACAAGTCAGCCCAGGAAGCCTATAAGTCATACATACGCGCTTATGATTCCCA
TTCTCTGAAGCAGATCTTCAATGTCAATAACTTAAATTTGCCTCAGGTGGCACTGTCTTTCGGCTTCAAGGTGCCTCCTT
TTGTGGATCTGAATGTGAACAGCAACGATGGCAAGGTTCGAAAGAGAGGAGGCGGCGGGGGATTCGGCTACCAGAAAACC
AAGAAGGTTGAGAAATCCATCATCTTCAAGCACATCAGCAAGAAGCCGTCCGACCGCAGGCAGTTCTCTCACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004191 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021414 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000017607 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021343 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000533 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_1039 | 88.66 | 86.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000001701 retrocopies