Parental gene: | RIOK3, ENSOPRG00000004803 |
| Aliases: | None |
| Description: | RIO kinase 3 [Source:HGNC Symbol;Acc:11451] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_3100:386154..406359(+) |
>ENSOPRG00000004803
ATGGATCCTGTCGGAGTGGCGTCGCCTGAGCCAGGGACGGCAGCGGCCTGGGGCCCGAGCAAGTGTCCATGGGCCACACC
TCAAAATACAATGTCCTGTTCTTTGGCTGACGTCATGAGCGAACAGCTGGCTAAAGAACTGCAGTTGGAAGAAGAAGCTG
CTGCTTTTCCTGAAGTTGCTGCTGCTGATGGACCATTTGTCTCTGGAGAAAATGTTGACACCTCCAGTGATCTAATGCTG
GCCCAGATGCTACAGATGGAATTTGACAGAGAATATGACGCACAACTGAGGCGTGAAGAAAAGAAGTTCAATGGAGACAG
CAAAGTTTCTATTTCTTTTGAAAATTATCGAAAAGTGCATCCTTATGAAGACAGTGACAGCTCTGAAGACGAGGTTGACT
GGCAGGACACGCGTGATGATCCCTACAGACCAGCAAAACCAGTTCCCACTCCCAAAAAGGGCTTTATTGGAAAAGGAAAA
GACATCACTACCAAACATGATGAGGTTGTGTGTGGGAGAAAGAACACAGCGAGAATGGAAAATTTTGCGCCTGGCTTTCA
GGTTGGAGATGGAATTGGAATGGATTTGAAACTATCCAACCACGTTTTCAATGCCCTGAAACAGCATGCCTACTCCGAGG
AGCGCCGGAGCGCCCGTGTGCATGAGAAGAAGGAGCATTCTACCGCGGAAAAAGCAGTCGATCCTAAGACACGTCTACTT
ATGTATAAAATGATCAACTCTGGAATGTTGGAGGCAATCACTGGCTGTATTAGTACAGGAAAGGAATCTGTTGTCTTCCA
TGCCTATGGCGGGAGCATGGATGAGGAGAAGGAGGATTGTAAAGCTATACCCACAGAATGTGCCATCAAGGTATTTAAAA
CAACCCTTAATGAATTTAAGAATCGTGACAAATATATTAAAGATGATTTCAGGTTTAAAGATCGCTTCAGTAAACTAAAT
CCACGTAAGATCATCCGCATGTGGGCAGAGAAAGAAATGCACAATCTCACCAGAATGCAGAGAGCTGGAATTCCTTGTCC
AACAGTTGTACTGCTCAAGAAACACATTTTAGTTATGTCTTTTATTGGCCAAGATCAAGTTCCAGCCCCTAAATTAAAAG
AAGTAAAGCTCAGTAGTGAAGAATTGAAAGACGCTTACTACCAAACTCTTCATTTGATGCAGCAGCTGTATAATGAGTGC
ACTCTTGTCCATGCTGACCTCAGCGAGTACAACATGCTGTGGCATGCTGGGAAGGTCTGGTTGATTGACGTCAGTCAGTC
GGTAGAGCCAACCCATCCTCATGGCTTGGAATTCCTATTCCGGGACTGCAGGAATGTCTCCCAGTTTTTCCAGAAAGGAG
GAGTGAAAGAAGCTCTAGGTGAACGAGAACTCTTCAATGCTGTTTCAGGCTTAAATATCTCGGCAGATAATGAGGTGGAT
TTCTTAGCTGAGATAGAAGCTCTGGAGAAAATGAATGAAGATCATGTTCAGAAGAATGGAAGAAAAGCTGCTTCATTTTT
GAAAGACGATGGCGGCCCGCCAGTACTGTATAGTGAATAG
ATGGATCCTGTCGGAGTGGCGTCGCCTGAGCCAGGGACGGCAGCGGCCTGGGGCCCGAGCAAGTGTCCATGGGCCACACC
TCAAAATACAATGTCCTGTTCTTTGGCTGACGTCATGAGCGAACAGCTGGCTAAAGAACTGCAGTTGGAAGAAGAAGCTG
CTGCTTTTCCTGAAGTTGCTGCTGCTGATGGACCATTTGTCTCTGGAGAAAATGTTGACACCTCCAGTGATCTAATGCTG
GCCCAGATGCTACAGATGGAATTTGACAGAGAATATGACGCACAACTGAGGCGTGAAGAAAAGAAGTTCAATGGAGACAG
CAAAGTTTCTATTTCTTTTGAAAATTATCGAAAAGTGCATCCTTATGAAGACAGTGACAGCTCTGAAGACGAGGTTGACT
GGCAGGACACGCGTGATGATCCCTACAGACCAGCAAAACCAGTTCCCACTCCCAAAAAGGGCTTTATTGGAAAAGGAAAA
GACATCACTACCAAACATGATGAGGTTGTGTGTGGGAGAAAGAACACAGCGAGAATGGAAAATTTTGCGCCTGGCTTTCA
GGTTGGAGATGGAATTGGAATGGATTTGAAACTATCCAACCACGTTTTCAATGCCCTGAAACAGCATGCCTACTCCGAGG
AGCGCCGGAGCGCCCGTGTGCATGAGAAGAAGGAGCATTCTACCGCGGAAAAAGCAGTCGATCCTAAGACACGTCTACTT
ATGTATAAAATGATCAACTCTGGAATGTTGGAGGCAATCACTGGCTGTATTAGTACAGGAAAGGAATCTGTTGTCTTCCA
TGCCTATGGCGGGAGCATGGATGAGGAGAAGGAGGATTGTAAAGCTATACCCACAGAATGTGCCATCAAGGTATTTAAAA
CAACCCTTAATGAATTTAAGAATCGTGACAAATATATTAAAGATGATTTCAGGTTTAAAGATCGCTTCAGTAAACTAAAT
CCACGTAAGATCATCCGCATGTGGGCAGAGAAAGAAATGCACAATCTCACCAGAATGCAGAGAGCTGGAATTCCTTGTCC
AACAGTTGTACTGCTCAAGAAACACATTTTAGTTATGTCTTTTATTGGCCAAGATCAAGTTCCAGCCCCTAAATTAAAAG
AAGTAAAGCTCAGTAGTGAAGAATTGAAAGACGCTTACTACCAAACTCTTCATTTGATGCAGCAGCTGTATAATGAGTGC
ACTCTTGTCCATGCTGACCTCAGCGAGTACAACATGCTGTGGCATGCTGGGAAGGTCTGGTTGATTGACGTCAGTCAGTC
GGTAGAGCCAACCCATCCTCATGGCTTGGAATTCCTATTCCGGGACTGCAGGAATGTCTCCCAGTTTTTCCAGAAAGGAG
GAGTGAAAGAAGCTCTAGGTGAACGAGAACTCTTCAATGCTGTTTCAGGCTTAAATATCTCGGCAGATAATGAGGTGGAT
TTCTTAGCTGAGATAGAAGCTCTGGAGAAAATGAATGAAGATCATGTTCAGAAGAATGGAAGAAAAGCTGCTTCATTTTT
GAAAGACGATGGCGGCCCGCCAGTACTGTATAGTGAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000008343 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020556 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000003689 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006292 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021478 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000009062 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_946 | 66.23 | 87.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_1034 | 93.19 | 78.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004803 retrocopies