Parental gene: | ENSOPRG00000005566 |
| Aliases: | None |
| Description: | None |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_245:177821..235988(+) |
>ENSOPRG00000005566
ATGTCTTGCCACCTCAATTCGGAAAACCACCTGGATCCAGGCCCCATCTATGTCCGAGAAAATGGACAGCTGCACATGGT
CAGCCTGGCTCTGAATGGTGTCAGGAGTGGCCAGCCGCAACCGAGGCCTTTCGGACTGTTTTCCAAAGGCTTCTCTGTTG
AGCTGTGCATGAACAGGGAAGACGACACTGCCCAGAAGGAGAAGACGGATCATTTCATCTTCACGTACACCCGGGAGGGC
AATCTCCGCTACTCCGCCAAGTCGCTCTTCAGCCTCGTCCTGGACTTCATCTCCGACAACATTGACCATGTCGATTCCCT
CATTGGCTTTCCCGAGCAGATTGCCGAGAGACTGTTCTCTGCAGCCGAAGCCAGACAAAAGTTCACGGAGCCGGGCACAG
GGCTGAGGGCCTTGCGGAAATTCACCGAGGCCTACGGGCGTCTGGTGCTCTGCTCACTATGTCTGCGGGACAGGTATCTG
GTGATTTCAGAGAAACTCGAGGAGATAAAGTCCTTCCGGGAGCTTACCTGCTTGGATCTTTCCTGTTGCAAGCTTGGAGA
TGAGCATGAGCTTCTAGAACACCTCACCAATGAGGCCCTGTCTAGTGTCACTCAGCTCCACCTGAAGGATAATTGTTTGT
CTGACGCCGGGGTGCGGAAAATGACAGCACCCGTTCGCGTGATGAAACGAGGCCTTGGGAATCTAACACTATTAGACTTA
TCCTGTAACCCTAAGATCACAGATGCAGGAATTGGATACCTGTTCTGTTTTAGAAAGCTAAGCTGCTTAGATATCTCTGG
GACAGGGCTCAAGGATGTAAACGCCATCAAGCACAAGCTGCAGGCCCGCATGGGCCTCGTCCTCTCCCAAGTGTCTCTGA
AGGAATTCGATCACACTAACTGCAAGACCGAGGGCTGGGCCGACCAGATTGTCCGGCAGTGGGAGCGCCTGACGGTGAAA
CCCCTGAAGAAAGCGGCTGTCGTGGAGCCTCGAAAGACAGCTCAGTACTTCTATGGCAACCGCTTCCTGGCCGAGGCCTC
TTTACGATGTCCCCTGGACGACACCTGCCTGGACGCCAGTGAGAAGCTCCAGTTCCGGAAAGAGAAGCCTACAGAGGCCC
AGGGGCCGTTGTTGAACTGTGACACTGCCATCTCAATGCAGGAGCCCCAGAAGAGCAAGAAGAGGACTTTTGAGGAGTCA
GAGAAGGAGCCGAGTAACTCCCCACAGGCTCCCAAGCAGAAGTATGTGTGCCTCACTGTGCAGGACTGGGACCTGCTGAA
TTCCTACTGA
ATGTCTTGCCACCTCAATTCGGAAAACCACCTGGATCCAGGCCCCATCTATGTCCGAGAAAATGGACAGCTGCACATGGT
CAGCCTGGCTCTGAATGGTGTCAGGAGTGGCCAGCCGCAACCGAGGCCTTTCGGACTGTTTTCCAAAGGCTTCTCTGTTG
AGCTGTGCATGAACAGGGAAGACGACACTGCCCAGAAGGAGAAGACGGATCATTTCATCTTCACGTACACCCGGGAGGGC
AATCTCCGCTACTCCGCCAAGTCGCTCTTCAGCCTCGTCCTGGACTTCATCTCCGACAACATTGACCATGTCGATTCCCT
CATTGGCTTTCCCGAGCAGATTGCCGAGAGACTGTTCTCTGCAGCCGAAGCCAGACAAAAGTTCACGGAGCCGGGCACAG
GGCTGAGGGCCTTGCGGAAATTCACCGAGGCCTACGGGCGTCTGGTGCTCTGCTCACTATGTCTGCGGGACAGGTATCTG
GTGATTTCAGAGAAACTCGAGGAGATAAAGTCCTTCCGGGAGCTTACCTGCTTGGATCTTTCCTGTTGCAAGCTTGGAGA
TGAGCATGAGCTTCTAGAACACCTCACCAATGAGGCCCTGTCTAGTGTCACTCAGCTCCACCTGAAGGATAATTGTTTGT
CTGACGCCGGGGTGCGGAAAATGACAGCACCCGTTCGCGTGATGAAACGAGGCCTTGGGAATCTAACACTATTAGACTTA
TCCTGTAACCCTAAGATCACAGATGCAGGAATTGGATACCTGTTCTGTTTTAGAAAGCTAAGCTGCTTAGATATCTCTGG
GACAGGGCTCAAGGATGTAAACGCCATCAAGCACAAGCTGCAGGCCCGCATGGGCCTCGTCCTCTCCCAAGTGTCTCTGA
AGGAATTCGATCACACTAACTGCAAGACCGAGGGCTGGGCCGACCAGATTGTCCGGCAGTGGGAGCGCCTGACGGTGAAA
CCCCTGAAGAAAGCGGCTGTCGTGGAGCCTCGAAAGACAGCTCAGTACTTCTATGGCAACCGCTTCCTGGCCGAGGCCTC
TTTACGATGTCCCCTGGACGACACCTGCCTGGACGCCAGTGAGAAGCTCCAGTTCCGGAAAGAGAAGCCTACAGAGGCCC
AGGGGCCGTTGTTGAACTGTGACACTGCCATCTCAATGCAGGAGCCCCAGAAGAGCAAGAAGAGGACTTTTGAGGAGTCA
GAGAAGGAGCCGAGTAACTCCCCACAGGCTCCCAAGCAGAAGTATGTGTGCCTCACTGTGCAGGACTGGGACCTGCTGAA
TTCCTACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000016552 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022786 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_15 | 100.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000005566 retrocopies