Parental gene:

TRA2B, ENSOPRG00000007990

Aliases:None
Description:transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781]
Organism:Southern American pika (Ochotona princeps)
Coordinates:scaffold_3445:151147..167583(-)


>ENSOPRG00000007990
GCTCGGCTGCTGCGTCCCGGGAGGCTGCGGCGGAACCTCCTCGAGCCAGAGGCTCAGCTTCGACGGAAGCGCGGCGGGCG
ACAGCAGCCGGGCGTCATGAGCGACAGCGGCGAGCAGAACTACGGCGAGCGGGAATCCCGTTCTGCTTCCAGAAGTGGAA
GTGCTCACGGATCGGGGAAATCTGCAAGGCATACCCCTGCAAGGTCTCGCTCCAAGGAAGATTCCAGGCGGTCCAGATCA
AAGTCCAGGTCCAGATCTGAATCTAGGTCTAGATCCAGAAGAAGCTCTCGGAGGCATTATACAAGGTCGCGATCTCGGTC
CCGATCCCATAGACGATCCCGTAGCAGGTCTTACAGTAGAGATTATCGCAGACGGCATAGCCACAGCCATTCTCCCATGT
CTACTCGTAGGCGTCATGTTGGGAATCGGGCAAATCCTGACCCCAACTGTTGTCTTGGAGTATTTGGTTTGAGCTTGTAC
ACCACAGAAAGAGATCTGAGAGAAGTTTTTTCTAAATATGGTCCTATTGCTGATGTGTCTATTGTATATGACCAGCAGTC
TAGGCGTTCCAGAGGATTTGCCTTTGTTTATTTTGAAAATGTAGATGATGCCAAGGAAGCTAAAGAGCGTGCCAATGGAA
TGGAGCTTGATGGGCGTAGAATCAGAGTTGATTTCTCCATAACCAAAAGACCACATACTCCGACACCAGGAATTTACATG
GGGAGACCCACATATGGCAGTTCACGCCGTCGGGATTATTATGACAGAGGGTATGACCGAGGCTATGATGATCGAGACTA
TTACAGCAGATCGTATAGAGGAGGTGGTGGAGGAGGAGGTGGATGGAGAGCTGCTCAAGATAGAGATCAAATTTATAGAA
GACGGTCACCTTCTCCTTACTATAGTCGTGGAGGATACAGATCACGTTCCAGATCTCGATCCTACTCTCCTCGTCGCTAT
TAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001697 ortholog_one2one 2 retrogenes
retro_btau_1245, retro_btau_850,
Myotis lucifugus ENSMLUG00000005781 ortholog_one2one 2 retrogenes
retro_mluc_2565, retro_mluc_2567,
Mustela putorius furo ENSMPUG00000003157 ortholog_one2one 1 retrogene
retro_mputfur_673,
Mus musculus ENSMUSG00000022858 ortholog_one2one 6 retrogenes
retro_mmus_1187, retro_mmus_2253, retro_mmus_2313, retro_mmus_3139, retro_mmus_3617, retro_mmus_756,
Ochotona princeps ENSOPRG00000016593 within_species_paralog 1 retrogene
retro_opri_372,
Rattus norvegicus ENSRNOG00000001783 ortholog_one2one 4 retrogenes
retro_rnor_1130, retro_rnor_1915, retro_rnor_2156, retro_rnor_2807,
Tarsius syrichta ENSTSYG00000000388 possible_ortholog 1 retrogene
retro_tsyr_1632,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_24 79.54 94.38
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2. retro_opri_930 79.54 94.38
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Download FASTA sequences of all ENSOPRG00000007990 retrocopies