Parental gene: | PAPOLG, ENSOPRG00000009630 |
| Aliases: | None |
| Description: | poly(A) polymerase gamma [Source:HGNC Symbol;Acc:14982] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1366:58402..96122(+) |
>ENSOPRG00000009630
ATGAAAGAGATGTCTGCGAATACCATGCTGGACAGCCAGCGCCAACAAAAGCACTATGGAATTACTTCTCCAATTAGTTT
GGCATGTCCTAAAGAAATTGATCATATTTACACACAGAAGTTAATTGATGCAATGAAACCATTTGGAGTGTTTGAAGATG
AGGAAGAACTAAACCACAGGCTAGTTGTTCTTGGAAAATTGAATAATTTAGTAAAAGAATGGATTTCTGATATCAGTGAG
AGTAAGAATCTTCCACCTTCTGTTGTGGCTACTGTTGGTGGTAAAATTTTCACATTTGGATCCTATAGACTTGGAGTACA
CACTAAAGGAGCTGATATTGATGCACTCTGCGTAGCTCCAAGACATGTGGAGAGATCTGATTTTTTTCAGTCTTTTTTTG
AAAAACTGAAACATCAAGATGGCATTAGGAACTTAAGAGCTGTAGAAGATGCCTTTGTTCCTGTTATAAAATTTGAATTT
GATGGTATTGAAATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATTTCAGATAATTTAGATCTAAGAGATGACTC
TCGACTGAGAAGCCTTGATATACGGTGTATTCGCAGCCTAAATGGATGTAGAGTTACTGATGAAATTTTGCATTTAGTGC
CAAATAAAGAAACTTTCAGACTCACCTTAAGAGCAGTCAAATTGTGGGCAAAACGACGTGGTATTTATTCCAACATGCTT
GGATTCCTTGGAGGTGTCTCTTGGGCAATGCTTGTTGCAAGAACTTGCCAACTGTATCCAAATGCAGCAGCTTCTACTTT
AGTTCATAAATTCTTTTTAGTTTTTTCTAAGTGGGAATGGCCAAATCCTGTACTTTTGAAGCAACCAGAAGAAAGCAACT
TGAATTTGCCTGTCTGGGATCCCCGGGTAAATCCATCAGATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCCA
CAACAGAATTCTACGTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTCGCAGTCAC
AGATGAAATTCTTCAAGGGAAATCAGATTGGTCCAAACTACTTGAACCACCAAATTTCTTTCAAAAATACAGACATTACA
TAGTGTTGACTGCCAGTGCATCAACAGAAGAACACCATCTAGAATGGGTTGGATTAGTAGAATCAAAGATTCGTGTACTA
GTTGGAAACTTGGAACGTAATGAGTTTATTACTCTCGCCCATGTAAATCCCCAATCATTCCCAGGAAATAAGGAGCATCA
TAAAGACAACAACTATGTATCAATGTGGTTCCTCGGAATAATTTTTCGGAGAGTAGAAAATGCGGAAAGTGTTAACATAG
ACTTGACATATGATATACAGTCATTTACTGATACAGTATACAGACAGGCAAACAACATTATGTTAAAGGAGGGAATGAAA
GAAGCTACTCATGTAAAGAAAAAACAACTTCATCACTACCTGCCAGCAGAGATTCTTCAAAAGAAGAAAAAACAAAGTCT
CTCTGATGTCAGTAGAAGTGGACTTCAATCCAAAAGATCATCTCTGGATAGCAACTGTCTGGATAGCTCCAGAGACACTG
ATAATGGGACACCTTTTAATTCCCCAGTGTCTACAGACAAACCTTCCAAACCTCAGGGTCCTCCTGCAGGGGAAACAGAA
AGGAATAATACTGAACCTGCTGCTATAATTGTGGAGAAACCACTGAGTGTCCCACCAGCTCAAGGACTATCTATTCCAGT
CATTGGTGCAAAAGTTGACTCTACTGTAAAAGCAGCATCACCCCCAGCTGTATGTACCATTCCAACTGTTGTTGGGCGAA
ATGTCATTCCTCGAATTACAATACCCCACAATCCTGCCCAGGGACAATCACACCTCAATGGAATATCAAATATAACTAAA
AATGTTACACCCAAAAGATCTCATTCACCGTCCATAGATGGGACTTCCAAGAGGTTGAAAGACATAGAAAAGTTTATTCG
ACTTGAATCAGCCTTTAAGGATTCTCATGCTGCTGAAGAGAGAAAAAGAAAATCACTGGATGCTAATGGAGGAGAATCTA
TGCCTATCCCAACTATTGATACATCACGCAAAAAGAGACTACCTAGCAAAGAACTACCAGATTCATCATCACCAGTTCCA
GCAAATAATATCCGTGTCATCAAAAATTCCATTCGACTGACCCTTAATCGGTAA
ATGAAAGAGATGTCTGCGAATACCATGCTGGACAGCCAGCGCCAACAAAAGCACTATGGAATTACTTCTCCAATTAGTTT
GGCATGTCCTAAAGAAATTGATCATATTTACACACAGAAGTTAATTGATGCAATGAAACCATTTGGAGTGTTTGAAGATG
AGGAAGAACTAAACCACAGGCTAGTTGTTCTTGGAAAATTGAATAATTTAGTAAAAGAATGGATTTCTGATATCAGTGAG
AGTAAGAATCTTCCACCTTCTGTTGTGGCTACTGTTGGTGGTAAAATTTTCACATTTGGATCCTATAGACTTGGAGTACA
CACTAAAGGAGCTGATATTGATGCACTCTGCGTAGCTCCAAGACATGTGGAGAGATCTGATTTTTTTCAGTCTTTTTTTG
AAAAACTGAAACATCAAGATGGCATTAGGAACTTAAGAGCTGTAGAAGATGCCTTTGTTCCTGTTATAAAATTTGAATTT
GATGGTATTGAAATTGATCTAGTCTTTGCAAGACTGGCAATACAAACCATTTCAGATAATTTAGATCTAAGAGATGACTC
TCGACTGAGAAGCCTTGATATACGGTGTATTCGCAGCCTAAATGGATGTAGAGTTACTGATGAAATTTTGCATTTAGTGC
CAAATAAAGAAACTTTCAGACTCACCTTAAGAGCAGTCAAATTGTGGGCAAAACGACGTGGTATTTATTCCAACATGCTT
GGATTCCTTGGAGGTGTCTCTTGGGCAATGCTTGTTGCAAGAACTTGCCAACTGTATCCAAATGCAGCAGCTTCTACTTT
AGTTCATAAATTCTTTTTAGTTTTTTCTAAGTGGGAATGGCCAAATCCTGTACTTTTGAAGCAACCAGAAGAAAGCAACT
TGAATTTGCCTGTCTGGGATCCCCGGGTAAATCCATCAGATAGGTATCATCTCATGCCCATAATCACCCCTGCCTACCCA
CAACAGAATTCTACGTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAGAATTTAAACAAGGTCTCGCAGTCAC
AGATGAAATTCTTCAAGGGAAATCAGATTGGTCCAAACTACTTGAACCACCAAATTTCTTTCAAAAATACAGACATTACA
TAGTGTTGACTGCCAGTGCATCAACAGAAGAACACCATCTAGAATGGGTTGGATTAGTAGAATCAAAGATTCGTGTACTA
GTTGGAAACTTGGAACGTAATGAGTTTATTACTCTCGCCCATGTAAATCCCCAATCATTCCCAGGAAATAAGGAGCATCA
TAAAGACAACAACTATGTATCAATGTGGTTCCTCGGAATAATTTTTCGGAGAGTAGAAAATGCGGAAAGTGTTAACATAG
ACTTGACATATGATATACAGTCATTTACTGATACAGTATACAGACAGGCAAACAACATTATGTTAAAGGAGGGAATGAAA
GAAGCTACTCATGTAAAGAAAAAACAACTTCATCACTACCTGCCAGCAGAGATTCTTCAAAAGAAGAAAAAACAAAGTCT
CTCTGATGTCAGTAGAAGTGGACTTCAATCCAAAAGATCATCTCTGGATAGCAACTGTCTGGATAGCTCCAGAGACACTG
ATAATGGGACACCTTTTAATTCCCCAGTGTCTACAGACAAACCTTCCAAACCTCAGGGTCCTCCTGCAGGGGAAACAGAA
AGGAATAATACTGAACCTGCTGCTATAATTGTGGAGAAACCACTGAGTGTCCCACCAGCTCAAGGACTATCTATTCCAGT
CATTGGTGCAAAAGTTGACTCTACTGTAAAAGCAGCATCACCCCCAGCTGTATGTACCATTCCAACTGTTGTTGGGCGAA
ATGTCATTCCTCGAATTACAATACCCCACAATCCTGCCCAGGGACAATCACACCTCAATGGAATATCAAATATAACTAAA
AATGTTACACCCAAAAGATCTCATTCACCGTCCATAGATGGGACTTCCAAGAGGTTGAAAGACATAGAAAAGTTTATTCG
ACTTGAATCAGCCTTTAAGGATTCTCATGCTGCTGAAGAGAGAAAAAGAAAATCACTGGATGCTAATGGAGGAGAATCTA
TGCCTATCCCAACTATTGATACATCACGCAAAAAGAGACTACCTAGCAAAGAACTACCAGATTCATCATCACCAGTTCCA
GCAAATAATATCCGTGTCATCAAAAATTCCATTCGACTGACCCTTAATCGGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000014028 | ortholog_one2one | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010861 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006237 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_208 | 68.77 | 72.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_395 | 70.16 | 50.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_827 | 68.77 | 72.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_opri_861 | 70.16 | 50.20 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000009630 retrocopies