Parental gene: | MDM2, ENSOPRG00000009677 |
| Aliases: | None |
| Description: | MDM2 oncogene, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:6973] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2204:8839..32095(+) |
>ENSOPRG00000009677
ACGGTAAGGAGCTGGCAAATGTGCAATACCAACATGTCTGTGTCCACTGACGGTGCTGTAAGCACCTCACAGATCCCAGC
TTCGGAGCAGGAGACCCTGGTTAGACCAAAGCCATTGCTTTTGAAATTGTTAAAGTCTGTTGGTGCACAAAAAGACACTT
ATACCATGAAAGAGGTTATATTTTATCTTGGCCAGTACATTATGACTAAACGATTATATGATGAGAAGCACATTGTATAT
TGTTCAAATGATCTTGGAGATTTGTTTGGAGTTCCAAGCTTCTCTGTGAAAGAACACAGGAAAATATATACAATGATCTA
CAGAAACTTGGTAGTAGTCAATCAGCAGGAACCTTCCGATTCAGGCATGTCTATAAGTGAGGACAGATATCACCCTGAAG
GTGGGAATGATGAAAAGGAGCCTGGTCAAGAGCTGCAGGAAGAGAAGCCTTCATCTTCAAGTTTGGTTTCGAGACCATCT
ACCTCATCTAGAAGGAGAGCAATTAGTGAGACAGAAGGAAATTATGGGGAACTACCTGGTGAACGACAAAGAAGACGCCA
CAAATCTGATAACATGTCCCTTTCCCTTGACGAAAACCTGGCTGTCCGTCTATTGCGGAAGCTACTTTATGAAAGAAGTA
GTAGTAGTGAGCCTACCGACCCACCATCAAATGTTGATCTTGATGACCGTGTAAGTGAACACTCAGGTGATTGGCTGGAT
CAGGACTCCGATTCAGATCAGTTTAGTGTGGAATTTGAAGTTGAATCTCTCGATTCAGAAGATTATAGCCTTAGTGAAGA
AGGGCAGGACCTGTCAGATGAAGATGATGAGGTTTATCGAGTTACTGTGTACCAAGCAGGGGAGAGTGATACAGATTCAT
TTGAAGAAGACCCTGAAATCTCCCTAGCTGACTACTGGAAGTGTACTTCTTGCCATGAGATGAATCCTCCGCTCCCATCG
CATTGCAACAGATGTTGGGCTCTTCGTGAGAACTGGCTTCCTGAAGATAAGGGGAAGGATAAAGAGGGAATCTCTAAGAA
AGCCCCACTGGAAAACCCGACCCACTCGGAACAAGACTTTGATGTTCCTGATTGTAAAAAGTCCATAGCAGATGATTCTA
AAGAGGCAGGCGTTGAGGAAAATGACGATAAAAGCACACAAGCTTCTCAGTCACAAGAGAGCGAGGACTTTTCTCAGCCC
TGGACTTCTAACAGCGTTATTTATGGCAGCCAAGAGGACGTGAAGGAGTTTGAAAGGGAAGAAACGCAGGAAAAAGAAGA
GAGTACGGAACCCAGTTTCCCCCTGAATGCCATTGAACCGTGTGTGATTTGCCAGGGCCGACCTAAAAATGGTTGCATAG
TTCATGGCAAAACCGGACACCTGATGTCCTGCTTCACTTGTGCCAAGAAGCTGAAGAAAAGGAACAAGCCCTGCCCTGTA
TGTAGACAGCCTATTCAGATGATTGTGCTAACTTATTTCAACTAA
ACGGTAAGGAGCTGGCAAATGTGCAATACCAACATGTCTGTGTCCACTGACGGTGCTGTAAGCACCTCACAGATCCCAGC
TTCGGAGCAGGAGACCCTGGTTAGACCAAAGCCATTGCTTTTGAAATTGTTAAAGTCTGTTGGTGCACAAAAAGACACTT
ATACCATGAAAGAGGTTATATTTTATCTTGGCCAGTACATTATGACTAAACGATTATATGATGAGAAGCACATTGTATAT
TGTTCAAATGATCTTGGAGATTTGTTTGGAGTTCCAAGCTTCTCTGTGAAAGAACACAGGAAAATATATACAATGATCTA
CAGAAACTTGGTAGTAGTCAATCAGCAGGAACCTTCCGATTCAGGCATGTCTATAAGTGAGGACAGATATCACCCTGAAG
GTGGGAATGATGAAAAGGAGCCTGGTCAAGAGCTGCAGGAAGAGAAGCCTTCATCTTCAAGTTTGGTTTCGAGACCATCT
ACCTCATCTAGAAGGAGAGCAATTAGTGAGACAGAAGGAAATTATGGGGAACTACCTGGTGAACGACAAAGAAGACGCCA
CAAATCTGATAACATGTCCCTTTCCCTTGACGAAAACCTGGCTGTCCGTCTATTGCGGAAGCTACTTTATGAAAGAAGTA
GTAGTAGTGAGCCTACCGACCCACCATCAAATGTTGATCTTGATGACCGTGTAAGTGAACACTCAGGTGATTGGCTGGAT
CAGGACTCCGATTCAGATCAGTTTAGTGTGGAATTTGAAGTTGAATCTCTCGATTCAGAAGATTATAGCCTTAGTGAAGA
AGGGCAGGACCTGTCAGATGAAGATGATGAGGTTTATCGAGTTACTGTGTACCAAGCAGGGGAGAGTGATACAGATTCAT
TTGAAGAAGACCCTGAAATCTCCCTAGCTGACTACTGGAAGTGTACTTCTTGCCATGAGATGAATCCTCCGCTCCCATCG
CATTGCAACAGATGTTGGGCTCTTCGTGAGAACTGGCTTCCTGAAGATAAGGGGAAGGATAAAGAGGGAATCTCTAAGAA
AGCCCCACTGGAAAACCCGACCCACTCGGAACAAGACTTTGATGTTCCTGATTGTAAAAAGTCCATAGCAGATGATTCTA
AAGAGGCAGGCGTTGAGGAAAATGACGATAAAAGCACACAAGCTTCTCAGTCACAAGAGAGCGAGGACTTTTCTCAGCCC
TGGACTTCTAACAGCGTTATTTATGGCAGCCAAGAGGACGTGAAGGAGTTTGAAAGGGAAGAAACGCAGGAAAAAGAAGA
GAGTACGGAACCCAGTTTCCCCCTGAATGCCATTGAACCGTGTGTGATTTGCCAGGGCCGACCTAAAAATGGTTGCATAG
TTCATGGCAAAACCGGACACCTGATGTCCTGCTTCACTTGTGCCAAGAAGCTGAAGAAAAGGAACAAGCCCTGCCCTGTA
TGTAGACAGCCTATTCAGATGATTGTGCTAACTTATTTCAACTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000005885 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034779 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014702 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013758 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000002908 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_891 | 93.29 | 92.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000009677 retrocopies