Parental gene: | PDHA1, ENSPCAG00000004196 |
| Aliases: | None |
| Description: | pyruvate dehydrogenase (lipoamide) alpha 1 [Source:HGNC Symbol;Acc:8806] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | GeneScaffold_3039:3767..20192(+) |
>ENSPCAG00000004196
ATGAGGAAGATGCTTGCTGCCGTCTCCCGTGTGTTGTCGGGCGCTGCCCAGAAGCCGGCTAGCAGAGTGCTGGTGGCATC
CCGTAACTTTGCAAATGATGCTACATTTGAAATTAAGAAATGTGATCTCCATCGGTTGGAAGAGGGCCCCCCTGTCACAA
CCGTGCTCACCAGGGAGGATGGGCTCAGATACTACAGGATGATGCAGACTGTCCGCCGGATGGAGCTAAAGGCAGATCAG
CTGTATAAACAGAAAATCATCCGGGGCTTCTGTCATTTGTGTGATGGCCAGGAAGCGTGCTGTGTGGGGCTGGAGGCTGG
CATAAATCCCACCGACCATCTCATTACAGCCTATCGGGCTCATGGCTTTACCTTTACTCGTGGTCTTTCAGTCCGAGAAA
TCCTCGCAGAGCTAACAGGACGAAGAGGAGGTTGTGCTAAAGGAAAAGGAGGTTCAATGCATATGTACGCCAAGAACTTC
TATGGGGGCAATGGCATTGTTGGGGCTCAGGTGCCTCTGGGAGCTGGCATTGCTCTGGCCTGCAAGTACAATGGAAAAGA
TGAGGTTTGCTTGACTCTGTATGGTGACGGTGCTGCTAATCAGGGTCAGATATTTGAAGCCTACAATATGGCAGCTTTGT
GGAAATTGCCCTGTATTTTCATCTGTGAAAATAACCGCTATGGAATGGGGACGTCTGTCGAAAGAGCAGCAGCCAGCACT
GACTACTACAAGAGAGGCGATTTTATTCCTGGGCTGAGGGTAGATGGAATGGATGTCTTGTGTGTCCGGGAGGCTACAAA
GTTTGCAGCTGCCTATTGCAGATCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACATACCGTTACCATGGACACAGTA
TGAGTGATCCTGGGGTCAGCTACCGCACACGAGAGGAAATTCAGGAAGTAAGAAGTAAGAGTGATCCGATCATGCTGCTG
AAAGACAGAATGGTGAACAGCAACCTCGCCAGTGTTGAAGAATTAAAGGAAATTGATGTGGAAGTGAGAAAAGAAATTGA
GGATGCGGCCCAGTTTGCCACAGCTGATCCTGAACCACCTTTGGAGGAATTAGGCCATCACATCTACTGCAGTGAGCCAC
CTTTTGAAGTTCGAGGTGCCAATCAGTGGATCAAGTTTAAGTCAGTCAGTTAA
ATGAGGAAGATGCTTGCTGCCGTCTCCCGTGTGTTGTCGGGCGCTGCCCAGAAGCCGGCTAGCAGAGTGCTGGTGGCATC
CCGTAACTTTGCAAATGATGCTACATTTGAAATTAAGAAATGTGATCTCCATCGGTTGGAAGAGGGCCCCCCTGTCACAA
CCGTGCTCACCAGGGAGGATGGGCTCAGATACTACAGGATGATGCAGACTGTCCGCCGGATGGAGCTAAAGGCAGATCAG
CTGTATAAACAGAAAATCATCCGGGGCTTCTGTCATTTGTGTGATGGCCAGGAAGCGTGCTGTGTGGGGCTGGAGGCTGG
CATAAATCCCACCGACCATCTCATTACAGCCTATCGGGCTCATGGCTTTACCTTTACTCGTGGTCTTTCAGTCCGAGAAA
TCCTCGCAGAGCTAACAGGACGAAGAGGAGGTTGTGCTAAAGGAAAAGGAGGTTCAATGCATATGTACGCCAAGAACTTC
TATGGGGGCAATGGCATTGTTGGGGCTCAGGTGCCTCTGGGAGCTGGCATTGCTCTGGCCTGCAAGTACAATGGAAAAGA
TGAGGTTTGCTTGACTCTGTATGGTGACGGTGCTGCTAATCAGGGTCAGATATTTGAAGCCTACAATATGGCAGCTTTGT
GGAAATTGCCCTGTATTTTCATCTGTGAAAATAACCGCTATGGAATGGGGACGTCTGTCGAAAGAGCAGCAGCCAGCACT
GACTACTACAAGAGAGGCGATTTTATTCCTGGGCTGAGGGTAGATGGAATGGATGTCTTGTGTGTCCGGGAGGCTACAAA
GTTTGCAGCTGCCTATTGCAGATCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACATACCGTTACCATGGACACAGTA
TGAGTGATCCTGGGGTCAGCTACCGCACACGAGAGGAAATTCAGGAAGTAAGAAGTAAGAGTGATCCGATCATGCTGCTG
AAAGACAGAATGGTGAACAGCAACCTCGCCAGTGTTGAAGAATTAAAGGAAATTGATGTGGAAGTGAGAAAAGAAATTGA
GGATGCGGCCCAGTTTGCCACAGCTGATCCTGAACCACCTTTGGAGGAATTAGGCCATCACATCTACTGCAGTGAGCCAC
CTTTTGAAGTTCGAGGTGCCAATCAGTGGATCAAGTTTAAGTCAGTCAGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000001392 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009426 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017336 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015375 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_451 | 54.94 | 62.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPCAG00000004196 retrocopies