Parental gene:

ENSSHAG00000015375

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL849558.1:1770887..1795700(-)


>ENSSHAG00000015375
ATGCGAAAAATGCTCGCCGTCGTTTCCCGCGTGCTGACGGGCGCCTCCCAGAAACCGGGAGCTGCTAGTGAGGTTGGAAG
AGTGCTACTGGCATCCCGTAACTTTGCAAATGATGCTACCTTTGATATTAAGAAATGTGACATTCATCGGCTTGAGGAAG
GCCCTCCCACCACAGCAGTTCTCACTAGAGAGGAAGGACTCAAATACTATAAGATCATGCAGACTGTCCGTCGGATGGAA
TTGAAAGCAGACCAGCTATATAAGCAAAAGATTATCCGTGGGTTTTGCCACTTGTATGATGGACAGGAAGCTTGTTGTAT
GGGGCTTGAAGCTGGCATAAATCCTACAGATCATGTTATTACAGCCTATCGAGCTCATGGCTTTACATATACTCGTGGAC
TTCCTGTTCGAGAAATTTTGGCAGAGCTTACAGGAAGAAGAGGGGGATGTGCTAAAGGAAAGGGAGGATCTATGCACATG
TACGCCAAGAACTTCTACGGCGGCAATGGCATTGTTGGAGCTCAGGTACCTCTAGGAGCTGGTATTGCCCTCGCCTGTAA
GTACAATGAAAAAGATGAGATTTGTTTGACTTTGTATGGAGATGGTGCTGCTAATCAGGGTCAGATATTTGAAGCTTACA
ATATGGCAGCTTTGTGGAAATTGCCTTGTATTTTCATTTGTGAGAATAACCGATATGGAATGGGAACTTCTGTAGAGAGA
GCAGCAGCCAGCACTGACTATTACAAAAGAGGGGACTTTATTCCAGGAATAAGGGTAGATGGTATGGATGTTCTGTGTGT
TCGTGAAGCAACAAAATTTGCAGCTGCCTACTGTAGATCAGGAAAGGGCCCCATGTTGATGGAACTACAGACATATCGTT
ATCACGGACACAGCATGAGTGATCCTGGTGTCAGTTATCGCACTCGGGAAGAAATTCAGGAAGTGAGGAGTAAGAGTGAT
CCTATCATGCTTCTAAAAGACAGAATGGTGAACAACAATCTTGCCAGTATTGAAGAATTAAAGGAAATTGATGTTGAAGT
AAGGAAAGAGATTGAGGATGCTGCCCAGTTTGCTACAGCGGATCCAGAACCACCTTTGGAAGAATTAGGCTATCATATCT
ACTCCAGAGATCCACCTTTTGAAGTTCGAGGAGCAAATCAGTGGATCAAGTACAAATCTGTCAGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016730 ortholog_one2many 1 retrogene
retro_amel_400,
Bos taurus ENSBTAG00000019852 ortholog_many2many 2 retrogenes
retro_btau_100, retro_btau_1807,
Callithrix jacchus ENSCJAG00000005496 ortholog_many2many 2 retrogenes
retro_cjac_2414, retro_cjac_27,
Dipodomys ordii ENSDORG00000011848 ortholog_many2many 1 retrogene
retro_dord_35,
Equus caballus ENSECAG00000001964 ortholog_many2many 1 retrogene
retro_ecab_21,
Erinaceus europaeus ENSEEUG00000005485 ortholog_one2many 1 retrogene
retro_eeur_580,
Echinops telfairi ENSETEG00000001392 ortholog_one2many 1 retrogene
retro_etel_1802,
Homo sapiens ENSG00000131828 ortholog_many2many 1 retrogene
retro_hsap_41,
Gorilla gorilla ENSGGOG00000013574 ortholog_many2many 1 retrogene
retro_ggor_59,
Loxodonta africana ENSLAFG00000009426 ortholog_many2many 1 retrogene
retro_lafr_91,
Myotis lucifugus ENSMLUG00000012932 ortholog_many2many 2 retrogenes
retro_mluc_2363, retro_mluc_323,
Macaca mulatta ENSMMUG00000017336 ortholog_many2many 1 retrogene
retro_mmul_123,
Mustela putorius furo ENSMPUG00000003269 ortholog_one2many 1 retrogene
retro_mputfur_812,
Mus musculus ENSMUSG00000031299 ortholog_many2many 2 retrogenes
retro_mmus_63, retro_mmus_631,
Nomascus leucogenys ENSNLEG00000009805 ortholog_many2many 1 retrogene
retro_nleu_74,
Oryctolagus cuniculus ENSOCUG00000014748 ortholog_many2many 1 retrogene
retro_ocun_264,
Procavia capensis ENSPCAG00000004196 ortholog_one2many 1 retrogene
retro_pcap_451,
Pongo abelii ENSPPYG00000020171 ortholog_many2many 1 retrogene
retro_pabe_129,
Pan troglodytes ENSPTRG00000021717 ortholog_many2many 1 retrogene
retro_ptro_79,
Pteropus vampyrus ENSPVAG00000005420 ortholog_one2many 1 retrogene
retro_pvam_1306,
Sus scrofa ENSSSCG00000023643 ortholog_one2many 2 retrogenes
retro_sscr_1015, retro_sscr_281,
Ictidomys tridecemlineatus ENSSTOG00000015433 ortholog_one2many 1 retrogene
retro_itri_1529,
Tupaia belangeri ENSTBEG00000014313 ortholog_one2many 1 retrogene
retro_tbel_3327,
Tursiops truncatus ENSTTRG00000000660 ortholog_one2many 1 retrogene
retro_ttru_1427,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_84 85.60 99.74
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Download FASTA sequences of all ENSSHAG00000015375 retrocopies