Parental gene: | NASP, ENSPPYG00000001409 |
| Aliases: | None |
| Description: | nuclear autoantigenic sperm protein (histone-binding) [Source:HGNC Symbol;Acc:7644] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:184280847..184316204(-) |
>ENSPPYG00000001409
ATGGCCACGGAGTCCACAGCCACTGCCGCCGTCGCCACGGAGCTGGTTTCTGCCGACAAAATTGAAGATGTTCCTGCTCC
TTCTACATCTGCAGATAAAGTAGAGAGTCTGGATGTGGATAGTGAAGCTAAGAAACTATTGGGTTTAGGACAGAAACATC
TGGTGATGGGGGATATTCCAGCAGCTGTCAATGCATTCCAGGAAGCAGCTAGTCTTTTAGGTAAGAAGTATGGAGAGACA
GCTAATGAGTGTGGAGAAGCCTTCTTTTTCTATGGGAAATCACTTCTGGAATTGGCAAGAATGGAGAATGGTGTGTTGGG
AAACGCCTTGGAAGGTGTGCATGTGGAAGAGGAAGAAGGAGAAAAAACAGAAGATGAATCTCTGGTAGAAAATAATGATA
ACATAGATGAGGAAGCAAGGGAAGAGTTGAGAGAACAGGTTTATGACGCCATGGGAGAAAAAGAAGAAGCCAAAAAAACA
GAAGACAAGTCTTTGGCAAAGCCTGAAACTGATAAAGAACAGGACAGTGAAATGGAGAAGGGTGGAAGAGAAGATATGGA
TATAAGTGAATCTGCAGAGGAGCCACAGGAAAAAGTTGACTTGACTCTAGATTGGTTAACTGAAACCTCTGAAGAGGCAA
ACGGAGGAGCAGCACCAGAAGGACCGAATGAAGCTGAGGTCACTTCTGGGAAGCCAGAACAGGAAGTACCAGATGCTGAG
GAAGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAGAGTACAGAGAAAAAGGAGGTCAGGAGAAGCAGGGAGAGGTAAT
TGTGAGCATAGAGAAGCCAAAAGAAGTTTCAGAAGAGCAGCCTGTGGTGACTCTAGAAAAGCAGGGCACTGCAGTAGAGG
TAGAAGCAGAGTCTTTAGACCCGACAGTCAAGCCAGTGGATGTGGGTGGGGACGAGCCAGAGGAGAAGGTAGTTACCTCT
GAAAATGAGGCAGGAAAGGCGGTTCTTGAACAACTGGTAGGTCAAGAAGTGCCACCTGCTGAAGAGTCACCAGAGGTGAC
AACAGAGGCTGCAGAGGCCTCAGCTGTAGAGGCTGGATCAGAAGTCTCTGAAAAGCCTGGGCAGGAGGCTCCAGTTCTCC
CTAAGGATGGTGCAGTCAATGGACCGTCAGTTGTAGGAGATCAGACTCCTATTGAACCACAGACTTCTATAGAAAGACTG
ACAGAAACAAAAGATGGCTCAGGACTAGAGGAGAAGGTCAGGGCAAAGCTGGTTCCTAGTCAGGAGGAGACTAAGCTGTC
TGTAGAAGAGTCTGAGGCAGCTGGAGATGGGGTTGATACCAAGGTAGCCCAGGGAGCTACTGAGAAATCACCTGAAGACA
AAGTTCAGATAGCTGCTAATGAAGAGACACAAGAGAGAGAAGAACAGATGAAAGAGGGTGAAGAAACTGAAGGCTCAGAA
GAGGATGATAAAGAAAATGATAAGACTGAAGAAATGCCAAACGATTCAGTCCTTGAAAACAAGTCTCTTCAAGAAAATGA
AGAGGAGGAGATTGGGAACCTAGAGCTTGCCTGGGATATGCTGGATTTAGCAAAGATCATTTTTAAAAGGCAAGAAACAA
AAGAAGCACAGCTTTATGCTGCCCAGGCACATCTTAAACTCGGAGAAGTTAGTGTTGAATCTGAAAACTATGTGCAAGCT
GTGGAGGAGTTCCAGTCCTGCCTTAACCTGCAGGAACAGTACCTGGAAGCCCACGACCGTCTCCTTGCAGAGACCCACTA
CCAGCTGGGCTTGGCTTATGGGTACAACTCTCAGTATGATGAGGCAGTGGCACAGTTCAGCAAATCTATTGAAGTCATTG
AGAAGAGAATGGCTGTACTAAATGAGCAGGTGAAGGAGGCTGAAGGATCGTCTGCTGAATACAAGAAAGAAATCGAGGAA
CTAAAGGAACTGCTACCCGAAATTAGAGAGAAGATAGAAGATGCAAAGGAGTCTCAGCATAGTGGGAATGTAGCTGAACT
GGCTCTGAAAGCTACTCTGGTGGAGAGCTCTACTTCAGGTTTCACTCCTGGTGGAGGAGGCTCTTCAGTCTCCATGATTG
CCAGTAGAAAGCCAACAGACGGTGCTTCCTCATCAAATTGTGTGACTGATATTTCCCACCTTGTCAGAAAGAAGAGGAAA
CCAGAGGAAGAGAGTCCCCGGAAAGATGATGCAAAGAAAGCCAAACAGGAGCCGGAGGTGAACGGAGGCAGCGGGGATGC
TGTCCCCAGTGGAAATGAAGTTTCGGAAAACATGGAGGAGGAGGCTGAGAATCGGGCTGAAAGCCGGGCGGCAGTGGAGG
GGACAGTGGAGGCTGGAGCTACAGTTGAAAGCACTGCATGTTAA
ATGGCCACGGAGTCCACAGCCACTGCCGCCGTCGCCACGGAGCTGGTTTCTGCCGACAAAATTGAAGATGTTCCTGCTCC
TTCTACATCTGCAGATAAAGTAGAGAGTCTGGATGTGGATAGTGAAGCTAAGAAACTATTGGGTTTAGGACAGAAACATC
TGGTGATGGGGGATATTCCAGCAGCTGTCAATGCATTCCAGGAAGCAGCTAGTCTTTTAGGTAAGAAGTATGGAGAGACA
GCTAATGAGTGTGGAGAAGCCTTCTTTTTCTATGGGAAATCACTTCTGGAATTGGCAAGAATGGAGAATGGTGTGTTGGG
AAACGCCTTGGAAGGTGTGCATGTGGAAGAGGAAGAAGGAGAAAAAACAGAAGATGAATCTCTGGTAGAAAATAATGATA
ACATAGATGAGGAAGCAAGGGAAGAGTTGAGAGAACAGGTTTATGACGCCATGGGAGAAAAAGAAGAAGCCAAAAAAACA
GAAGACAAGTCTTTGGCAAAGCCTGAAACTGATAAAGAACAGGACAGTGAAATGGAGAAGGGTGGAAGAGAAGATATGGA
TATAAGTGAATCTGCAGAGGAGCCACAGGAAAAAGTTGACTTGACTCTAGATTGGTTAACTGAAACCTCTGAAGAGGCAA
ACGGAGGAGCAGCACCAGAAGGACCGAATGAAGCTGAGGTCACTTCTGGGAAGCCAGAACAGGAAGTACCAGATGCTGAG
GAAGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAGAGTACAGAGAAAAAGGAGGTCAGGAGAAGCAGGGAGAGGTAAT
TGTGAGCATAGAGAAGCCAAAAGAAGTTTCAGAAGAGCAGCCTGTGGTGACTCTAGAAAAGCAGGGCACTGCAGTAGAGG
TAGAAGCAGAGTCTTTAGACCCGACAGTCAAGCCAGTGGATGTGGGTGGGGACGAGCCAGAGGAGAAGGTAGTTACCTCT
GAAAATGAGGCAGGAAAGGCGGTTCTTGAACAACTGGTAGGTCAAGAAGTGCCACCTGCTGAAGAGTCACCAGAGGTGAC
AACAGAGGCTGCAGAGGCCTCAGCTGTAGAGGCTGGATCAGAAGTCTCTGAAAAGCCTGGGCAGGAGGCTCCAGTTCTCC
CTAAGGATGGTGCAGTCAATGGACCGTCAGTTGTAGGAGATCAGACTCCTATTGAACCACAGACTTCTATAGAAAGACTG
ACAGAAACAAAAGATGGCTCAGGACTAGAGGAGAAGGTCAGGGCAAAGCTGGTTCCTAGTCAGGAGGAGACTAAGCTGTC
TGTAGAAGAGTCTGAGGCAGCTGGAGATGGGGTTGATACCAAGGTAGCCCAGGGAGCTACTGAGAAATCACCTGAAGACA
AAGTTCAGATAGCTGCTAATGAAGAGACACAAGAGAGAGAAGAACAGATGAAAGAGGGTGAAGAAACTGAAGGCTCAGAA
GAGGATGATAAAGAAAATGATAAGACTGAAGAAATGCCAAACGATTCAGTCCTTGAAAACAAGTCTCTTCAAGAAAATGA
AGAGGAGGAGATTGGGAACCTAGAGCTTGCCTGGGATATGCTGGATTTAGCAAAGATCATTTTTAAAAGGCAAGAAACAA
AAGAAGCACAGCTTTATGCTGCCCAGGCACATCTTAAACTCGGAGAAGTTAGTGTTGAATCTGAAAACTATGTGCAAGCT
GTGGAGGAGTTCCAGTCCTGCCTTAACCTGCAGGAACAGTACCTGGAAGCCCACGACCGTCTCCTTGCAGAGACCCACTA
CCAGCTGGGCTTGGCTTATGGGTACAACTCTCAGTATGATGAGGCAGTGGCACAGTTCAGCAAATCTATTGAAGTCATTG
AGAAGAGAATGGCTGTACTAAATGAGCAGGTGAAGGAGGCTGAAGGATCGTCTGCTGAATACAAGAAAGAAATCGAGGAA
CTAAAGGAACTGCTACCCGAAATTAGAGAGAAGATAGAAGATGCAAAGGAGTCTCAGCATAGTGGGAATGTAGCTGAACT
GGCTCTGAAAGCTACTCTGGTGGAGAGCTCTACTTCAGGTTTCACTCCTGGTGGAGGAGGCTCTTCAGTCTCCATGATTG
CCAGTAGAAAGCCAACAGACGGTGCTTCCTCATCAAATTGTGTGACTGATATTTCCCACCTTGTCAGAAAGAAGAGGAAA
CCAGAGGAAGAGAGTCCCCGGAAAGATGATGCAAAGAAAGCCAAACAGGAGCCGGAGGTGAACGGAGGCAGCGGGGATGC
TGTCCCCAGTGGAAATGAAGTTTCGGAAAACATGGAGGAGGAGGCTGAGAATCGGGCTGAAAGCCGGGCGGCAGTGGAGG
GGACAGTGGAGGCTGGAGCTACAGTTGAAAGCACTGCATGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .42 RPM |
| SRP007412_cerebellum | 63 .60 RPM |
| SRP007412_heart | 16 .38 RPM |
| SRP007412_kidney | 27 .61 RPM |
| SRP007412_liver | 29 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010436 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000132780 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001037 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028693 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014434 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000677 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3338 | 90.35 | 87.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001409 retrocopies