Parental gene:

CDC20, ENSPPYG00000001448

Aliases:None
Description:cell division cycle 20 [Source:HGNC Symbol;Acc:1723]
Organism:Orangutan (Pongo abelii)
Coordinates:1:186556404..186560311(-)


>ENSPPYG00000001448
ATGGCACAGTTCGCGTTCGAGAGTGACCTGCACTCGCTGCTTCAGCTGGATGCACCCATCCCCAATGCACCCCCTGCGCG
CTGGCAGCGCAAAGCCAAGGAAGCCGCAGGCCCGGCCCCCTCACCCATGCGGGCCGCCAACCGATCCCACAGCGCCGGCA
GAACTCCGGGCCGAACTCCTGGCAAATCCAGTTCCAAGGTTCAGACCACTCCTAGCAAACCTGGCGGTGACCGCTATATC
CCCCATCGCAGTGCTGCCCAGATGGAGGTGGCCAGCTTCCTCCTGAGCAAGGAGAACCAGCCTGAAAACAGCCAGACGCC
CACCAAGAAGGAACATCAGAAAGCCTGGGCTTTGAACCTGAACGGTTTTGATGTAGAGGAAGCCAAGATCCTTCGGCTCA
GTGGAAAACCACAAAATGCGCCAGAGGGTTACCAGAACAGACTGAAAGTACTCTACAGCCAAAAGGCCACTCCTGGCTCC
AGCCGGAAGACCTGCCGTTACATTCCTTCCCTGCCAGACCGTATCCTGGATGCGCCTGAAATCCGAAATGACTATTACCT
GAACCTTGTGGATTGGAGCTCTGGGAATGTACTGGCCGTGGCACTGGACAACAGTGTGTACCTGTGGAGCGCAAGCTCTG
GTGACATCCTGCAGCTTTTGCAAATGGAGCAGCCTGGGGAATATGTATCCTCTGTGGCCTGGATCAAAGAGGGCAACTAC
TTGGCTGTGGGCACCAGCAGTGCTGAGGTGCAGCTATGGGATGTGCAGCAGCAGAAACGGCTTCGAAATATGACCAGTCA
CTCTGCCCGAGTGGGCTCCCTAAGCTGGAACAGCTATATCCTGTCCAGTGGTTCACGTTCTGGCCACATCCACCACCATG
ATGTTCGGGTAGCAGAACACCATGTGGCCACACTGAGTGGCCACAGCCAGGAAGTGTGTGGGCTGCGCTGGGCCCCAGAT
GGACGACATTTGGCCAGTGGTGGCAATGATAACTTGGTCAATGTGTGGCCTAGTGCTCCTGGAGAGGGTGGCTGGGTTCC
TCTGCAGACATTCACCCAGCATCAAGGGGCTGTCAAGGCCGTAGCATGGTGTCCCTGGCAGTCCAATGTCCTGGCAACAG
GAGGGGGCACCAGTGATCGACACATTCGCATCTGGAACGTGTGCTCTGGGGCCTGTCTGAGTGCCGTAGATGCCCATTCC
CAGGTGTGCTCCATCCTCTGGTCTCCCCACTACAAGGAGCTCATCTCAGGCCATGGCTTTGCACAGAACCAGCTAGTTAT
TTGGAAGTACCCAACCATGGCCAAGGTGGCTGAACTCAAAGGTCACACATCCCGGGTCCTAAGTCTGACCATGAGCCCAG
ATGGGGCCACAGTGGCATCCGCAGCAGCAGATGAGACCCTGAGGCTATGGCGCTGTTTTGAGTTGGACCCTGCGCGGCGG
CGGGAGCGGGAGAAGGCCAGTGCAGCCAAAAGCAGCCTCATCCACCAAGGCATCCGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .50 RPM
SRP007412_cerebellum 0 .36 RPM
SRP007412_heart 0 .60 RPM
SRP007412_kidney 1 .86 RPM
SRP007412_liver 0 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006680 ortholog_one2one 2 retrogenes
retro_chof_2172, retro_chof_2286,
Callithrix jacchus ENSCJAG00000003414 ortholog_one2one 1 retrogene
retro_cjac_1608,
Homo sapiens ENSG00000117399 ortholog_one2one 1 retrogene
retro_hsap_4187,
Gorilla gorilla ENSGGOG00000010419 ortholog_one2one 1 retrogene
retro_ggor_96,
Mus musculus ENSMUSG00000006398 ortholog_one2one 1 retrogene
retro_mmus_1536,
Nomascus leucogenys ENSNLEG00000013419 ortholog_one2one 1 retrogene
retro_nleu_2847,
Pan troglodytes ENSPTRG00000000634 ortholog_one2one 1 retrogene
retro_ptro_2843,
Tarsius syrichta ENSTSYG00000012703 ortholog_one2one 3 retrogenes
retro_tsyr_1560, retro_tsyr_442, retro_tsyr_938,
Tursiops truncatus ENSTTRG00000010813 ortholog_one2one 1 retrogene
retro_ttru_1309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3428 93.79 100.00
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Download FASTA sequences of all ENSPPYG00000001448 retrocopies