Parental gene:

CDC20, ENSPTRG00000000634

Aliases:None
Description:Pan troglodytes cell division cycle 20 homolog (S. cerevisiae) (CDC20), mRNA. [Source:RefSeq mRNA;Acc:NM_001243972]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:43674761..43678647(+)


>ENSPTRG00000000634
TCACTGCTTCTGGATGCACCCATCCCCGCACCCCCTGCGCGCTGGCAGCGCAAAGTTGAAGCCGCAGGCCCGGCCCCCTC
ACCCATGCGGGCCGCCAACCGATCCCACAGCGCCGGCAGGACTCCGGGCCGAACTCCTGGCAAATCCAGTTCCAAGGTTC
AGACCACTCCTAGCAACCCTGGCGGTGACCGCTATATCCCCCATCGCAGTGCTGCCCAGATGAGGGTGGCCAGCTTCCTC
NTGAGCAAGGAGAACCAGCCTGAAAACAGCCAGACGCCCACCAAGAAGGAACATCAGAAAGCCTGGGCTTTGAACCTGAA
CGGTTTTGATGTAGAGGAAGCCAAGATCCTTCGGCTCAGTGGAAAACCACAAAATGCGCCAGAGGGTTACCAGAACAGAC
TGAAAGTACTCTACAGCCAAAAGGCCACTCCTGGCTCCAGCCGGAAGACCTGCCGTTACATTCCTTCCCTGCCAGACCGT
ATCCTGGATGCGCCTGAAATCCGAAATGACTATTACCTGAACCTTGTGGATTGGAGTTCTGGGAATGTACTGGCCGTGGC
ACTGGACAACAGTGTGTACCTGTGGAGTGCAAGCTCTGGTGACATCCTGCAGCTTTTGCAAATGGAGCAGCCTGGGGAAT
ATATATCCTCTGTGGCCTGGATCAAAGAGGGCAACTACTTGGCTGTGGGCACCAGCAGTGCTGAGGTGCAGCTATGGGAT
GTGCAGCAGCAGAAACGGCTTCGAAATATGACCAGTCACTCTGCCCGAGTGGGCTCCCTAAGCTGGAACAGCTATATCCT
GTCCAGTGGTTCACGTTCTGGCCACATCCACCACCATGATGTTCGGGTAGCAGAACACCATGTGGCCACACTGAGTGGCC
ACAGCCAGGAAGTGTGTGGGCTGCGCTGGGCCCCAGATGGACGACATTTGGCCAGTGGTGGTAATGATAACTTGGTCAAT
GTGTGGCCTAGTGCTCCTGGAGAGGGTGGCTGGGTTCCTCTGCAGACATTCACCCAGCATCAAGGGGCTGTCAAGGCCGT
AGCATGGTGTCCCTGGCAGTCCAATGTCCTGGCAACAGGAGGGGGCACCAGTGATCGACACATTCGCATCTGGAATGTGT
GCTCTGGGGCCTGTCTGAGTGCCGTGGATGCCCATTCCCAGGTGTGCTCCATCCTCTGGTCTCCCCACTACAAGGAGCTC
ATCTCAGGCCATGGCTTTGCACAGAACCAGCTAGTTATTTGGAAGTACCCAACCATGGCCAAGGTGGCTGAACTCAAAGG
TCACACATCCCGGGTCCTGAGTCTGACCATGAGCCCAGATGGGGCCACAGTGGCATCCGCAGCAGCAGATGAGACCCTGA
GGCTATGGCGCTGTTTTGAGTTGGACCCTGCGCGGCGGCGGGAGCGGGAGAAGGCCAGTGCAGCCAAAAGCAGCCTCATC
CACCAAGGCATCCGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .45 RPM
SRP007412_cerebellum 1 .90 RPM
SRP007412_heart 0 .55 RPM
SRP007412_kidney 2 .85 RPM
SRP007412_liver 3 .40 RPM
SRP007412_testis 79 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006680 ortholog_one2one 2 retrogenes
retro_chof_2172, retro_chof_2286,
Callithrix jacchus ENSCJAG00000003414 ortholog_one2one 1 retrogene
retro_cjac_1608,
Homo sapiens ENSG00000117399 ortholog_one2one 1 retrogene
retro_hsap_4187,
Gorilla gorilla ENSGGOG00000010419 ortholog_one2one 1 retrogene
retro_ggor_96,
Mus musculus ENSMUSG00000006398 ortholog_one2one 1 retrogene
retro_mmus_1536,
Nomascus leucogenys ENSNLEG00000013419 ortholog_one2one 1 retrogene
retro_nleu_2847,
Pongo abelii ENSPPYG00000001448 ortholog_one2one 1 retrogene
retro_pabe_3428,
Tarsius syrichta ENSTSYG00000012703 ortholog_one2one 3 retrogenes
retro_tsyr_1560, retro_tsyr_442, retro_tsyr_938,
Tursiops truncatus ENSTTRG00000010813 ortholog_one2one 1 retrogene
retro_ttru_1309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2843 91.56 99.79
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Download FASTA sequences of all ENSPTRG00000000634 retrocopies