Parental gene:

CDCA8, ENSPPYG00000001526

Aliases:None
Description:cell division cycle associated 8 [Source:HGNC Symbol;Acc:14629]
Organism:Orangutan (Pongo abelii)
Coordinates:1:192449539..192465515(-)


>ENSPPYG00000001526
ATGTTGTGGGACGGCGGCTTCTCATTCGTCAGCCTGTGGCTGTGGAGTTTGAATTGGGTGGCGGTTGACTGTAGAGTCGC
TCTCTCGCTGGCACAGCGAGGTTTTGCTCAGCCTTTGTCTCGGGACCGCAGGTACGTGCCTGGCGACTTCTTCGGGTGGT
CCCCGTCCGCCCTTCTCGTCCCTACCCGGTTCCTTGCCTCCCTGCCCCATCTCCGCCGCTCCCCGCAGCCTCCGCCGAGT
GCCATGGCTCCTAGGAAGGGCAGTAGTCGGGTGGCCAAGACCAACTCCTTACGGAGGCGGAAGCTCGCCTCCTTTCTGAA
AGACTTCGACCGTGAAGTGGAAATACGAGTCAAGCAAATTGAGTCAGACAGGCAGAACCTCCTCAAGGAGGTGGATAACC
TCTACAACATCGAGATCCTGCGGCTCCCCAAGGCTCTGCGCGAGATGAACTGGCTTGACTACTTCGCCCTTGGAGGAAAC
AAACAGGCCCTGGAAGAGGCGGCAACAGCTGACCTGGATATCACCGAAATAAACAAACTAACAGCAGAAGCTATTCAGAC
ACCCCTGAAATCTGCCAAAACACGAAAGGTAATACAAGTAGATGAAATGATAGTGGAAGAGGAAGAAGAAGAGGAAAATG
AACATAAGAATCTTCAAACTGCAAGAGTCAAAAGGTGTCCTCCATCCAAGAAGAGAACTCAGTCCATACAAGGAAAAGGC
AAAAGGAAAAGGGTCTTCAAGACCCCTGGCCTGCGTACTCCAGCAGCAGGAGAGCGGATTTACAACATCTCAGGGAATGG
CAGCCCTCTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGAGCCTGCGATTATTGGCCAGTGACTTGCAGAGGC
ACAGTATTGCCCAGCTGGATCCAGAGGCCTTGGGAAACATTAAGAAGCTCTCTAACCGTCTCGCCCAAATCTGCAGCAGC
ATACGGACCCACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .33 RPM
SRP007412_cerebellum 0 .36 RPM
SRP007412_heart 0 .15 RPM
SRP007412_kidney 0 .27 RPM
SRP007412_liver 0 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000028556 ortholog_one2one 2 retrogenes
retro_acar_139, retro_acar_200,
Choloepus hoffmanni ENSCHOG00000004959 ortholog_one2one 1 retrogene
retro_chof_679,
Callithrix jacchus ENSCJAG00000002008 ortholog_one2one 1 retrogene
retro_cjac_380,
Homo sapiens ENSG00000134690 ortholog_one2one 1 retrogene
retro_hsap_4052,
Gorilla gorilla ENSGGOG00000007719 ortholog_one2one 2 retrogenes
retro_ggor_2594, retro_ggor_2721,
Microcebus murinus ENSMICG00000011926 ortholog_one2one 1 retrogene
retro_mmur_1589,
Macaca mulatta ENSMMUG00000014340 ortholog_one2one 2 retrogenes
retro_mmul_1611, retro_mmul_2339,
Nomascus leucogenys ENSNLEG00000011630 ortholog_one2one 2 retrogenes
retro_nleu_2803, retro_nleu_3006,
Pan troglodytes ENSPTRG00000000552 ortholog_one2one 3 retrogenes
retro_ptro_2531, retro_ptro_2533, retro_ptro_2746,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3224 76.61 52.62
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2. retro_pabe_3234 64.74 51.38
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Download FASTA sequences of all ENSPPYG00000001526 retrocopies