Parental gene: | CDCA8, ENSPTRG00000000552 |
| Aliases: | CDCA8, borealin |
| Description: | Pan troglodytes cell division cycle associated 8 (CDCA8), mRNA. [Source:RefSeq mRNA;Acc:NM_001246430] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:37925115..37942378(+) |
>ENSPTRG00000000552
ATGGCTCCTAGGAAGGGCAGTAGTCGGGTGGCCAAGACCAACTCCTTACGGAGGCGGAAGCTCGCCTCCTTTCTGAAAGA
CTTCGACCGTGAAGTGGAAATACGAATCAAGCAAATTGAGTCAGACAGGCAGAACCTCCTCAAGGAGGTGGATAACCTCT
ACAACATCGAGATCCTGCGGCTCCCCAAGGCTCTGCGCGAGATGAACTGGCTTGACTACTTCGCCCTTGGAGGAAACAAA
CAGGCCCTGGAAGAGGCGGCAACAGCTGACCTGGATATCACCGAAATAAACAAACTAACAGCAGAAGCTATTCAGACACC
CCTGAAATCTGCCAAAACACGAAAGGTAATACAGGTAGATGAAATGATAGTGGAAGAGGAAGAAGAAGAAGAAAATGAAC
ATAAGAATCTTCAAACTGCAAGAGTCAAAAGGTGTCCTCCATCCAAGAAGAGAACTCAGTCCATACAAGGAAAAGGAAAA
AGGAAAAGGTCAAGCCGTGCTAACACTGTTACCCCAGCCGTGGGTCGATTGGAGGTGTCCATGGTCAAACCAACTCCAGG
CCTGACACCCAGGTTTGACTCAAGGGTCTTCAAGACCCCTGGCCTGCGTACTCCAGCAGCAGGAGAGCGGATTTACAACA
TCTCAGGGAATGGCAGCCCTCTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGGCGGCGGAGAGAGCCTGCGA
TTATTGGCCAGTGACTTGCAGAGACACAGTATTGCCCAGCTGGATCCAGAGGCCTTGGGAAACATTAAGAAGCTCTCTAA
CCGTCTCGCCCAAATCTGCAGCAGCATACGGACCCACAAATGA
ATGGCTCCTAGGAAGGGCAGTAGTCGGGTGGCCAAGACCAACTCCTTACGGAGGCGGAAGCTCGCCTCCTTTCTGAAAGA
CTTCGACCGTGAAGTGGAAATACGAATCAAGCAAATTGAGTCAGACAGGCAGAACCTCCTCAAGGAGGTGGATAACCTCT
ACAACATCGAGATCCTGCGGCTCCCCAAGGCTCTGCGCGAGATGAACTGGCTTGACTACTTCGCCCTTGGAGGAAACAAA
CAGGCCCTGGAAGAGGCGGCAACAGCTGACCTGGATATCACCGAAATAAACAAACTAACAGCAGAAGCTATTCAGACACC
CCTGAAATCTGCCAAAACACGAAAGGTAATACAGGTAGATGAAATGATAGTGGAAGAGGAAGAAGAAGAAGAAAATGAAC
ATAAGAATCTTCAAACTGCAAGAGTCAAAAGGTGTCCTCCATCCAAGAAGAGAACTCAGTCCATACAAGGAAAAGGAAAA
AGGAAAAGGTCAAGCCGTGCTAACACTGTTACCCCAGCCGTGGGTCGATTGGAGGTGTCCATGGTCAAACCAACTCCAGG
CCTGACACCCAGGTTTGACTCAAGGGTCTTCAAGACCCCTGGCCTGCGTACTCCAGCAGCAGGAGAGCGGATTTACAACA
TCTCAGGGAATGGCAGCCCTCTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGGCGGCGGAGAGAGCCTGCGA
TTATTGGCCAGTGACTTGCAGAGACACAGTATTGCCCAGCTGGATCCAGAGGCCTTGGGAAACATTAAGAAGCTCTCTAA
CCGTCTCGCCCAAATCTGCAGCAGCATACGGACCCACAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .16 RPM |
| SRP007412_cerebellum | 1 .43 RPM |
| SRP007412_heart | 0 .44 RPM |
| SRP007412_kidney | 1 .15 RPM |
| SRP007412_liver | 3 .27 RPM |
| SRP007412_testis | 62 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000028556 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004959 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002008 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134690 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007719 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011926 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014340 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011630 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001526 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2531 | 76.43 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2533 | 78.57 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2746 | 51.79 | 87.50 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000552 retrocopies