Parental gene:

CDCA8, ENSPTRG00000000552

Aliases:CDCA8, borealin
Description:Pan troglodytes cell division cycle associated 8 (CDCA8), mRNA. [Source:RefSeq mRNA;Acc:NM_001246430]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:37925115..37942378(+)


>ENSPTRG00000000552
ATGGCTCCTAGGAAGGGCAGTAGTCGGGTGGCCAAGACCAACTCCTTACGGAGGCGGAAGCTCGCCTCCTTTCTGAAAGA
CTTCGACCGTGAAGTGGAAATACGAATCAAGCAAATTGAGTCAGACAGGCAGAACCTCCTCAAGGAGGTGGATAACCTCT
ACAACATCGAGATCCTGCGGCTCCCCAAGGCTCTGCGCGAGATGAACTGGCTTGACTACTTCGCCCTTGGAGGAAACAAA
CAGGCCCTGGAAGAGGCGGCAACAGCTGACCTGGATATCACCGAAATAAACAAACTAACAGCAGAAGCTATTCAGACACC
CCTGAAATCTGCCAAAACACGAAAGGTAATACAGGTAGATGAAATGATAGTGGAAGAGGAAGAAGAAGAAGAAAATGAAC
ATAAGAATCTTCAAACTGCAAGAGTCAAAAGGTGTCCTCCATCCAAGAAGAGAACTCAGTCCATACAAGGAAAAGGAAAA
AGGAAAAGGTCAAGCCGTGCTAACACTGTTACCCCAGCCGTGGGTCGATTGGAGGTGTCCATGGTCAAACCAACTCCAGG
CCTGACACCCAGGTTTGACTCAAGGGTCTTCAAGACCCCTGGCCTGCGTACTCCAGCAGCAGGAGAGCGGATTTACAACA
TCTCAGGGAATGGCAGCCCTCTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGGCGGCGGAGAGAGCCTGCGA
TTATTGGCCAGTGACTTGCAGAGACACAGTATTGCCCAGCTGGATCCAGAGGCCTTGGGAAACATTAAGAAGCTCTCTAA
CCGTCTCGCCCAAATCTGCAGCAGCATACGGACCCACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .16 RPM
SRP007412_cerebellum 1 .43 RPM
SRP007412_heart 0 .44 RPM
SRP007412_kidney 1 .15 RPM
SRP007412_liver 3 .27 RPM
SRP007412_testis 62 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000028556 ortholog_one2one 2 retrogenes
retro_acar_139, retro_acar_200,
Choloepus hoffmanni ENSCHOG00000004959 ortholog_one2one 1 retrogene
retro_chof_679,
Callithrix jacchus ENSCJAG00000002008 ortholog_one2one 1 retrogene
retro_cjac_380,
Homo sapiens ENSG00000134690 ortholog_one2one 1 retrogene
retro_hsap_4052,
Gorilla gorilla ENSGGOG00000007719 ortholog_one2one 2 retrogenes
retro_ggor_2594, retro_ggor_2721,
Microcebus murinus ENSMICG00000011926 ortholog_one2one 1 retrogene
retro_mmur_1589,
Macaca mulatta ENSMMUG00000014340 ortholog_one2one 2 retrogenes
retro_mmul_1611, retro_mmul_2339,
Nomascus leucogenys ENSNLEG00000011630 ortholog_one2one 2 retrogenes
retro_nleu_2803, retro_nleu_3006,
Pongo abelii ENSPPYG00000001526 ortholog_one2one 2 retrogenes
retro_pabe_3224, retro_pabe_3234,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2531 76.43 100.00
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2. retro_ptro_2533 78.57 100.00
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3. retro_ptro_2746 51.79 87.50
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Download FASTA sequences of all ENSPTRG00000000552 retrocopies