Parental gene: | NUDC, ENSPPYG00000001673 |
| Aliases: | None |
| Description: | nuclear distribution C homolog (A. nidulans) [Source:HGNC Symbol;Acc:8045] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:203425793..203451263(-) |
>ENSPPYG00000001673
ATGGGCGGAGAGCAGGAGGAGGAGCGGTTCGACGGCATGTTGCTGGCCATGGCTCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAAGGGATGGCAGAGAAGC
TTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGTGGGAGAAGAGAGCCCGGCAGGAGGCCGAG
CGGCGGGAGAAGGCGGAGCGGGCGGCCAGACTGGCCAAGGAAGCGAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCT
AACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCCCCAGGGAAGCAGGAGACTGAGGAAGATGAGGAGGAGGAAGATGAGAAGGACAAAGGAAAACTG
AAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCAGTCCC
TTTCCGTGTGAACTTCCGGCTGAAAGGGAAGGACGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGG
GGCAGCCAGCGATCATCGATGGGGAGCTCTACAACGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAAGACGGCAAG
GTGGTGACTGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACAC
CAAGAAGATTAACCCCGAGAATTCCAAGCTGTCAGACCTAGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAAGTTCATGGATCAG
CATCCGGAGATGGATTTTTCCAAGGCTAAATTCAACTAG
ATGGGCGGAGAGCAGGAGGAGGAGCGGTTCGACGGCATGTTGCTGGCCATGGCTCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAAGGGATGGCAGAGAAGC
TTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGTGGGAGAAGAGAGCCCGGCAGGAGGCCGAG
CGGCGGGAGAAGGCGGAGCGGGCGGCCAGACTGGCCAAGGAAGCGAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCT
AACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCCCCAGGGAAGCAGGAGACTGAGGAAGATGAGGAGGAGGAAGATGAGAAGGACAAAGGAAAACTG
AAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCAGTCCC
TTTCCGTGTGAACTTCCGGCTGAAAGGGAAGGACGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGG
GGCAGCCAGCGATCATCGATGGGGAGCTCTACAACGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAAGACGGCAAG
GTGGTGACTGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACAC
CAAGAAGATTAACCCCGAGAATTCCAAGCTGTCAGACCTAGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAAGTTCATGGATCAG
CATCCGGAGATGGATTTTTCCAAGGCTAAATTCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 265 .17 RPM |
| SRP007412_cerebellum | 137 .53 RPM |
| SRP007412_heart | 69 .96 RPM |
| SRP007412_kidney | 155 .56 RPM |
| SRP007412_liver | 115 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000001291 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000090273 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015314 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000015671 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028851 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009404 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000395 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004408 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007399 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2055 | 79.77 | 78.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2064 | 84.06 | 62.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001673 retrocopies