Parental gene: | NUDC, ENSPTRG00000000395 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:26924005..26949440(+) |
>ENSPTRG00000000395
ATGGGCGGAGAGCAGGAGGAGGAGCGGTTCGACGGCATGTTGCTGGCCATGGCTCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAAGGGATGGCAGAGAAGC
TTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGCGGGAGAAGAGAGCCCGGCAGGAGGCCGAG
CGGCGGGAGAAGGCGGAGCGGGCAGCCAGACTGGCCAAGGAAGCCAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCT
AACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCCCCAGGGAAGCAGGAGACTGAGGAAGATGAGGAGGAGGAAGATGAGAAGGACAAAGGAAAACTG
AAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCGGTCCC
TTTCTGTGTGAACTTCCGGCTGAAAGGGAAGGACGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGG
GGCAGCCAGCGATCATCGATGGGGAGCTCTACAATGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAGGACGGCAAG
GTGGTGACTGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACAC
CAAGAAGATTAACCCTGAGAATTCCAAGCTGTCGGACCTGGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAAGTTCATGGATCAA
CATCCGGAGATGGATTTTTCCAAGGCTAAATTCAACTAG
ATGGGCGGAGAGCAGGAGGAGGAGCGGTTCGACGGCATGTTGCTGGCCATGGCTCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAAGGGATGGCAGAGAAGC
TTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGCGGGAGAAGAGAGCCCGGCAGGAGGCCGAG
CGGCGGGAGAAGGCGGAGCGGGCAGCCAGACTGGCCAAGGAAGCCAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCT
AACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCCCCAGGGAAGCAGGAGACTGAGGAAGATGAGGAGGAGGAAGATGAGAAGGACAAAGGAAAACTG
AAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCGGTCCC
TTTCTGTGTGAACTTCCGGCTGAAAGGGAAGGACGTGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGG
GGCAGCCAGCGATCATCGATGGGGAGCTCTACAATGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAGGACGGCAAG
GTGGTGACTGTGCATCTGGAGAAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACAC
CAAGAAGATTAACCCTGAGAATTCCAAGCTGTCGGACCTGGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAAGTTCATGGATCAA
CATCCGGAGATGGATTTTTCCAAGGCTAAATTCAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 159 .28 RPM |
| SRP007412_cerebellum | 149 .92 RPM |
| SRP007412_heart | 61 .24 RPM |
| SRP007412_kidney | 98 .30 RPM |
| SRP007412_liver | 149 .37 RPM |
| SRP007412_testis | 133 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000001291 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000090273 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015314 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000015671 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028851 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009404 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001673 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000004408 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007399 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1655 | 80.46 | 78.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1661 | 87.82 | 71.39 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000395 retrocopies