Parental gene: | BTRC, ENSPPYG00000002583 |
| Aliases: | None |
| Description: | F-box/WD repeat-containing protein 1A [Source:RefSeq peptide;Acc:NP_001124974] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:100365863..100577056(+) |
>ENSPPYG00000002583
ATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAAGCACTCAAGTTTATGTGCTCTATGCCCAGGTCTCTGTGGCTGGGCTG
CTCCAGCCTGGCGGACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGAATT
CCTCAGAGAGAGAAGACTGTAATAATGGCGAACCCCCTAGGAAGATAATACCAGAGAAGAATTCACTTAGACAGACGTAC
AACAGCTGTGCCAGACTCTGCTTAAACCAAGAAACAGTATGTTTAGCAAGCACTGCTATGAAGACTGAGAATTGTGTGGC
CAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGCAAGCTATGAAAAGGAAA
AGGAACTGTGTGTCAAATACTTTGAGCAGTGGTCAGAGTCAGATCAAGTGGAATTTGTGGAACATCTTATATCCCAAATG
TGTCATTACCAACATGGGCACATAAACTCGTATCTTAAACCTATGTTGCAGAGAGATTTCATAACTGCTCTGCCAGCTCG
GGGTTTGGATCATATTGCTGAGAACATTCTGTCATACCTGGATGCCAAATCACTATGTGCTGCTGAACTTGTGTGCAAGG
AATGGTACCGAGTGACCTCTGATGGCATGCTGTGGAGGAAGCTCATCGAGAGAATGGTCAGGACAGATTCTCTGTGGAGA
GGCCTGGCAGAACGAAGAGGATGGGGACAGTATTTATTCAAAAACAAACCTCCTGACGGGAATGCTGCTCCCAACTCTTT
TTATAGAGCACTTTATCCTAAAATTATACAAGACATTGAGACAATAGAATCTAATTGGAGATGTGGAAGACATAGTTTAC
AGAGAATTCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTTTACAGTATGATGATCAGAAAATAGTGAGCGGCCTT
CGAGACAACACAATCAAGATCTGGGATAAAAACACATTGGAATGCAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCT
CTGTCTCCAGTATGATGAGAGAGTGATCATAACGGGATCATCGGATTCCACAGTCAGAGTATGGGATGTAAATACAGGTG
AAATGCTAAACACTTTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAATGGCATGATGGTGACCTGCTCC
AAAGATCGTTCCATTGCTGTATGGGATATGGCCTCCCCAACTGACATTACCCTCCGGAGGGTGCTGGTCGGACACCGAGC
TGCTGTCAATGTTGTAGACTTTGATGACAAGTACATCGTTTCTGCATCTGGGGATAGAACTATAAAGGTGTGGAACACAA
GTACTTGTGAATTTGTAAGGACCTTAAATGGGCACAAACGAGGCATTGCCTGTTTGCAGTACAGGGACAGGCTGGTAGTG
AGTGGCTCATCTGACAACACTATCAGATTATGGGACATAGAATGTGGTGCATGTTTACGAGTGTTAGAAGGCCATGAGGA
ATTGGTGCGTTGTATTCGATTTGATAACAAGAGGATAGTCAGTGGGGCCTATGATGGAAAAATTAAAGTGTGGGATCTTG
TGGCTGCTTTGGACCCCCGTGCTCCTGCAGGGACACTCTGTCTACGGACCCTTGTGGAGCATTCCGGAAGAGTTTTTCGA
CTCCAGTTTGATGAATTCCAGATTGTCAGTAGTTCACATGATGACACAATCCTCATCTGGGACTTCTTAAATGATCCAGC
TGCCCAAGCTGAACCCCCCCATTCCCCTTCTCGAACATACACCTACATCTCCAGATAA
ATGGACCCGGCCGAGGCGGTGCTGCAAGAGAAAGCACTCAAGTTTATGTGCTCTATGCCCAGGTCTCTGTGGCTGGGCTG
CTCCAGCCTGGCGGACAGCATGCCTTCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCACAGCTTTCCAGAATT
CCTCAGAGAGAGAAGACTGTAATAATGGCGAACCCCCTAGGAAGATAATACCAGAGAAGAATTCACTTAGACAGACGTAC
AACAGCTGTGCCAGACTCTGCTTAAACCAAGAAACAGTATGTTTAGCAAGCACTGCTATGAAGACTGAGAATTGTGTGGC
CAAAACAAAACTTGCCAATGGCACTTCCAGTATGATTGTGCCCAAGCAACGGAAACTCTCAGCAAGCTATGAAAAGGAAA
AGGAACTGTGTGTCAAATACTTTGAGCAGTGGTCAGAGTCAGATCAAGTGGAATTTGTGGAACATCTTATATCCCAAATG
TGTCATTACCAACATGGGCACATAAACTCGTATCTTAAACCTATGTTGCAGAGAGATTTCATAACTGCTCTGCCAGCTCG
GGGTTTGGATCATATTGCTGAGAACATTCTGTCATACCTGGATGCCAAATCACTATGTGCTGCTGAACTTGTGTGCAAGG
AATGGTACCGAGTGACCTCTGATGGCATGCTGTGGAGGAAGCTCATCGAGAGAATGGTCAGGACAGATTCTCTGTGGAGA
GGCCTGGCAGAACGAAGAGGATGGGGACAGTATTTATTCAAAAACAAACCTCCTGACGGGAATGCTGCTCCCAACTCTTT
TTATAGAGCACTTTATCCTAAAATTATACAAGACATTGAGACAATAGAATCTAATTGGAGATGTGGAAGACATAGTTTAC
AGAGAATTCACTGCCGAAGTGAAACAAGCAAAGGAGTTTACTGTTTACAGTATGATGATCAGAAAATAGTGAGCGGCCTT
CGAGACAACACAATCAAGATCTGGGATAAAAACACATTGGAATGCAAGCGAATTCTCACAGGCCATACAGGTTCAGTCCT
CTGTCTCCAGTATGATGAGAGAGTGATCATAACGGGATCATCGGATTCCACAGTCAGAGTATGGGATGTAAATACAGGTG
AAATGCTAAACACTTTGATTCACCATTGTGAAGCAGTTCTGCACTTGCGTTTCAATAATGGCATGATGGTGACCTGCTCC
AAAGATCGTTCCATTGCTGTATGGGATATGGCCTCCCCAACTGACATTACCCTCCGGAGGGTGCTGGTCGGACACCGAGC
TGCTGTCAATGTTGTAGACTTTGATGACAAGTACATCGTTTCTGCATCTGGGGATAGAACTATAAAGGTGTGGAACACAA
GTACTTGTGAATTTGTAAGGACCTTAAATGGGCACAAACGAGGCATTGCCTGTTTGCAGTACAGGGACAGGCTGGTAGTG
AGTGGCTCATCTGACAACACTATCAGATTATGGGACATAGAATGTGGTGCATGTTTACGAGTGTTAGAAGGCCATGAGGA
ATTGGTGCGTTGTATTCGATTTGATAACAAGAGGATAGTCAGTGGGGCCTATGATGGAAAAATTAAAGTGTGGGATCTTG
TGGCTGCTTTGGACCCCCGTGCTCCTGCAGGGACACTCTGTCTACGGACCCTTGTGGAGCATTCCGGAAGAGTTTTTCGA
CTCCAGTTTGATGAATTCCAGATTGTCAGTAGTTCACATGATGACACAATCCTCATCTGGGACTTCTTAAATGATCCAGC
TGCCCAAGCTGAACCCCCCCATTCCCCTTCTCGAACATACACCTACATCTCCAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 118 .82 RPM |
| SRP007412_cerebellum | 97 .28 RPM |
| SRP007412_heart | 21 .13 RPM |
| SRP007412_kidney | 23 .24 RPM |
| SRP007412_liver | 16 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000013579 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016280 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1856 | 75.62 | 60.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002583 retrocopies