Parental gene:

ENSPPYG00000003107

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:11:11652566..11662749(-)


>ENSPPYG00000003107
ATGTCCAGCCAGGTGGTGGGCATTGAGCCTCTCTACATCAAGGCAGAGCCGGCCAGCCCCGACAGTCCAAAGGGTTCCTC
GGAGACGGAGACCGAGCCTCCTGTGGCCCTGGCCCCTGGTCCAGCTCCCACTCGCTGCCTCCCAGGCCACAAGGAAGAGG
AGGATGGGGAGGGGGCTGGGCCTGGCGAGCAGGGCGGTGGGAAGCTTGTGCTCAGCTCCCTGCCCAAGCGCCTCTGCCTG
GTCTGTGGGGACGTGGCCTCCGGCTACCACTATGGTGTGGCATCCTGTGAGGCCTGCAAAGCCTTCTTCAAGAGGACCAT
CCAGGGGAGCATCGAGTACAGCTGTCCGGCCTCCAACGAGTGTGAGATCACCAAGCGGAGACGCAAGGCCTGCCAGGCCT
GCCGCTTCACCAAGTGCCTGCGGGTGGGCATGCTCAAGGAGGGAGTGCGCCTGGACCGCGTCCGGGGTGGGCGGCAGAAG
TACAAGCGGCGGCCGGAGGTGGACCCACTGCCCTTCCCGGGCCCCTTCCCTGCTGGGCCCCTGGCAGTCGCTGGAGGTCC
CCGGAAGACAGCAGCCCCAGTAAATGCACTGGTGTCTCATCTGCTGGTGGTTGAGCCTGAGAAGCTCTATGCCATGCCTG
ACCCTGCAGGCCCTGATGGGCACCTCCCAGCCGTGGCTACCCTCTGTGACCTCTTTGACCGAGAGATCGTGGTCACCATC
AGCTGGGCCAAGAGCATCCCAGGCTTCTCATCGCTGTCGCTGTCTGACCAGATGTCAGTACTGCAGAGCGTGTGGATGGA
GGTGCTGGTGCTGGGTGTGGCCCAGCGCTCACTGCCACTGCAGGATGAGCTGGCCTTTGCTGAGGATTTAGTCCTGGATG
AAGAGGGGGCACGGGCAGCTGGCCTGGGGGAACTGGGGGCTGCCCTGCTGCAACTAGTGCGGCGGCTGCAGGCCCTGCGG
CTGGAGCGAGAGGAGTATGTTCTACTGAAGGCCCTGGCCCTTGCCAATTCAGACTCTGTGCACATCGAAGATGCCGAGGC
TGTGGAGCAGCTGCGAGAAGCTCTGCACGAGGCCCTGCTGGAGTACGAAGCCGGCCGGGCTGGCCCCGGAGGGGGTGCTG
AGCGGCGGCGGGCGGGCAGGCTGCTGCTCACGCTACCGCTCCTCCGCCAGACAGCGGGCAAAGTGCTGGCCCATTTCTAT
GGGGTGAAGCTGGAGGGCAAGGTGCCCATGCACAAGCTGTTCTTGGAGATGCTCGAGGCCATGATGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .99 RPM
SRP007412_cerebellum 2 .31 RPM
SRP007412_heart 9 .03 RPM
SRP007412_kidney 11 .37 RPM
SRP007412_liver 4 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018030 ortholog_one2many 3 retrogenes
retro_cjac_3845, retro_cjac_3982, retro_cjac_4023,
Echinops telfairi ENSETEG00000000262 ortholog_one2many 1 retrogene
retro_etel_733,
Homo sapiens ENSG00000173153 ortholog_one2many 2 retrogenes
retro_hsap_1171, retro_hsap_1237,
Gorilla gorilla ENSGGOG00000001333 ortholog_one2many 1 retrogene
retro_ggor_970,
Macaca mulatta ENSMMUG00000017803 ortholog_one2many 1 retrogene
retro_mmul_1275,
Nomascus leucogenys ENSNLEG00000004971 ortholog_one2many 2 retrogenes
retro_nleu_2855, retro_nleu_2856,
Pan troglodytes ENSPTRG00000003833 ortholog_one2many 1 retrogene
retro_ptro_851,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_63 98.11 100.00
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Download FASTA sequences of all ENSPPYG00000003107 retrocopies