Parental gene:

ESRRA, ENSPTRG00000003833

Aliases:None
Description:Estrogen-related receptor alpha [Source:UniProtKB/TrEMBL;Acc:K7DJ98]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:62228571..62239747(+)


>ENSPTRG00000003833
ATGTCCAGCCAGGTGGTGGGCATTGAGCCTCTCTACATCAAGGCAGAGCCGGCCAGCCCCGACAGTCCAAAGGGTTCCTC
GGAGACGGAGACCGAGCCTCCTGTGGCCCTGGCCCCTGGTCCAGCTCCCACTCGCTGCCTCCCAGGCCACAAGGAAGAGG
AGGATGGGGAGGGGGCTGGGCCTGGCGAGCAGGGCGGTGGGAAGCTGGTGCTCAGCTCCCTGCCCAAGCGCCTCTGCCTG
GTCTGTGGGGACGTGGCCTCCGGCTACCACTATGGTGTGGCATCCTGTGAGGCCTGCAAAGCCTTCTTCAAGAGGACCAT
CCAGGGGAGCATCGAGTACAGCTGTCCGGCCTCCAACGAGTGTGAGATCACCAAGCGGAGACGCAAGGCCTGCCAGGCCT
GCCGCTTCACCAAGTGCCTGCGGGTGGGCATGCTCAAGGAGGGAGTGCGCCTGGACCGTGTCCGGGGTGGGCGGCAGAAG
TACAAGCGGCGGCCGGAGGTGGACCCACTGCCCTTCCCGGGCCCCTTCCCTGCTGGGCCCCTGGCAGTCGCTGGAGGCCC
CCGGAAGACAGCAGCCCCAGTGAATGCACTGGTGTCTCATCTGCTGGTGGTTGAGCCTGAGAAGCTCTATGCCATGCCTG
ACCCCGCAGGCCCTGATGGGCACCTCCCAGCCGTGGCTACCCTCTGTGACCTCTTTGACCGAGAGATTGTGGTCACCATC
AGCTGGGCCAAGAGCATCCCAGGCTTCTCATCGCTGTCGCTGTCTGACCAGATGTCAGTACTGCAGAGCGTGTGGATGGA
GGTGCTGGTGCTGGGTGTGGCCCAGCGCTCACTGCCACTGCAGGATGAGCTGGCCTTCGCTGAGGACTTAGTCCTGGATG
AAGAGGGGGCACGGGCAGCTGGCCTGGGGGAACTGGGGGCTGCCCTGCTGCAACTAGTGCGGCGGCTGCAGGCCCTGCGG
CTGGAGCGAGAGGAGTATGTTCTACTAAAGGCCTTGGCCCTTGCCAATTCAGACTCTGTGCACATCGAAGATGCCGAGGC
TGTGGAGCAGCTGCGAGAAGCTCTGCACGAGGCCCTGCTGGAGTACGAAGCCGGCCGGGCTGGCCCCGGAGGGGGTGCTG
AGCGGCGGCGGGCGGGCAGGCTGCTGCTCACGCTACCGCTCCTCCGCCAGACAGCGGGCAAAGTGCTGGCCCATTTCTAT
GGGGTGAAGCTGGAGGGCAAGGTGCCCATGCACAAGCTGTTCTTGGAGATGCTTGAGGCCATGATGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 42 .90 RPM
SRP007412_cerebellum 34 .59 RPM
SRP007412_heart 48 .73 RPM
SRP007412_kidney 125 .48 RPM
SRP007412_liver 67 .60 RPM
SRP007412_testis 3 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018030 ortholog_one2one 3 retrogenes
retro_cjac_3845, retro_cjac_3982, retro_cjac_4023,
Echinops telfairi ENSETEG00000000262 ortholog_one2one 1 retrogene
retro_etel_733,
Homo sapiens ENSG00000173153 ortholog_one2one 2 retrogenes
retro_hsap_1171, retro_hsap_1237,
Gorilla gorilla ENSGGOG00000001333 ortholog_one2one 1 retrogene
retro_ggor_970,
Macaca mulatta ENSMMUG00000017803 ortholog_one2one 1 retrogene
retro_mmul_1275,
Nomascus leucogenys ENSNLEG00000004971 ortholog_one2one 2 retrogenes
retro_nleu_2855, retro_nleu_2856,
Pongo abelii ENSPPYG00000003107 ortholog_one2many 1 retrogene
retro_pabe_63,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_851 90.61 65.25
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Download FASTA sequences of all ENSPTRG00000003833 retrocopies