Parental gene: | RAB6A, ENSPPYG00000003663 |
| Aliases: | None |
| Description: | Ras-related protein Rab-6A [Source:UniProtKB/Swiss-Prot;Acc:Q5RAV6] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:69048593..69137836(-) |
>ENSPPYG00000003663
ATGTCCACGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAAAGCGTTGGAAAGAC
ATCTTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CTATGTACTTGGAGGATCGAACAGTACGATTGCAATTATGGGACACAGCAGGTCAAGAGCGGTTCAGGAGCTTGATTCCT
AGCTACATTCGTGACTCCACTGTGGCAGTTGTTGTTTATGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAGTG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTTATGTTTATTGAAACTAGTGCAAAAGCTGGA
TACAATGTAAAGCAGCTCTTTCGACGTGTAGCAGCAGCTTTGCCGGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGA
CATGATTGACATAAAACTGGAAAAGCCTCAGGAGCAACCAGTCAGTGAAGGAGGCTGTTCCTGCTAA
ATGTCCACGGGCGGAGACTTCGGGAATCCGCTGAGGAAATTCAAGCTGGTGTTCCTGGGGGAGCAAAGCGTTGGAAAGAC
ATCTTTGATCACCAGATTCATGTATGACAGTTTTGACAACACCTATCAGGCAACAATTGGCATTGACTTTTTATCAAAAA
CTATGTACTTGGAGGATCGAACAGTACGATTGCAATTATGGGACACAGCAGGTCAAGAGCGGTTCAGGAGCTTGATTCCT
AGCTACATTCGTGACTCCACTGTGGCAGTTGTTGTTTATGATATCACAAATGTTAACTCATTCCAGCAAACTACAAAGTG
GATTGATGATGTCAGAACAGAAAGAGGAAGTGATGTTATCATCATGCTAGTAGGAAATAAAACAGATCTTGCTGACAAGA
GGCAAGTGTCAATTGAGGAGGGAGAGAGGAAAGCCAAAGAGCTGAATGTTATGTTTATTGAAACTAGTGCAAAAGCTGGA
TACAATGTAAAGCAGCTCTTTCGACGTGTAGCAGCAGCTTTGCCGGGAATGGAAAGCACACAGGACAGAAGCAGAGAAGA
CATGATTGACATAAAACTGGAAAAGCCTCAGGAGCAACCAGTCAGTGAAGGAGGCTGTTCCTGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 213 .03 RPM |
| SRP007412_cerebellum | 129 .63 RPM |
| SRP007412_heart | 37 .87 RPM |
| SRP007412_kidney | 52 .80 RPM |
| SRP007412_liver | 32 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000992 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009412 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000175582 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009905 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000030704 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017098 | possible_ortholog | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000031623 | possible_ortholog | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000001164 | possible_ortholog | 5 retrogenes | |
| Ochotona princeps | ENSOPRG00000010355 | possible_ortholog | 6 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000023497 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2097 | 92.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2191 | 91.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3537 | 92.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003663 retrocopies