Parental gene: | CCDC84, ENSPPYG00000003948 |
| Aliases: | None |
| Description: | coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:30460] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:115941003..115957180(+) |
>ENSPPYG00000003948
ATGGCGCCAGCGCAGCGCTGCCCTCTGTGCCGCCAGACCTTCTTCTGTGGTCGCGGGCACGTTTACAGCCGCAAGCACCA
GCGGCAGCTGAAGGAGGCTTTGGAGAGGCTCCTGCCCCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGG
AGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGAGGTGCGGGAACACCTGAGCCATGGA
AACCTGACGGTGCTGTACGGGGGGCTGCTGGAGCATCTGGCCAGCCCAGAGCACAAGAAAGCAACCAACAAATTCTGGTG
GGAGAACAAAGCTGAGGTCCAGATGAAAGAGAAGTTTCTGGTCACTCCCCAGGATTATGCACGATTCAAGAAATCCATGG
TGAAAGGTTTGGATTCCTATGAAGAAAAGGAGGATGAAGTGATCAAGGAGATGGCAGCTCAGATCCGTGAAGTGGAGCAG
AGCCGACAGGAGGTGGTTCGGTCTGTCTTAGAGCCTCAGACAGTGCCAGACCCAGAAGAGGGCTCTTCAGCACATGGAAG
CTGGAAAGGGATAAACAGCCAAGTAGCTTCCAGCTCACAGCAGCCCGCAAACTTGGACCTGCCACCAGCTCCAGAGCTTG
ACTGGATGGAGACAGGACCATCTCTGACATTCATTGGCCATCAGGATATACCAGGAGTTGGTAACATCCACTCAGGTGCC
ACACCTCCCTGGATGATCCAAGATGAATACACTGCTGGGAACCAAGAAATAGGACCATCCTATGAAGAATTTCTTAAAGA
AAAGGAAAAACAGAAGTTGAAAAAACTCCCCCCAGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCAGTGCAG
GCTGGCTGCCCTCTTTTGGCCGCGTCTGGAATAATGGACGCCGCTGGCAGTCCAGACATCAATTCAAAACTGAAGCTGCA
GCAATGAAGAAGCAGTCACATACAGAAAAAAGCTAA
ATGGCGCCAGCGCAGCGCTGCCCTCTGTGCCGCCAGACCTTCTTCTGTGGTCGCGGGCACGTTTACAGCCGCAAGCACCA
GCGGCAGCTGAAGGAGGCTTTGGAGAGGCTCCTGCCCCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGG
AGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGAGGTGCGGGAACACCTGAGCCATGGA
AACCTGACGGTGCTGTACGGGGGGCTGCTGGAGCATCTGGCCAGCCCAGAGCACAAGAAAGCAACCAACAAATTCTGGTG
GGAGAACAAAGCTGAGGTCCAGATGAAAGAGAAGTTTCTGGTCACTCCCCAGGATTATGCACGATTCAAGAAATCCATGG
TGAAAGGTTTGGATTCCTATGAAGAAAAGGAGGATGAAGTGATCAAGGAGATGGCAGCTCAGATCCGTGAAGTGGAGCAG
AGCCGACAGGAGGTGGTTCGGTCTGTCTTAGAGCCTCAGACAGTGCCAGACCCAGAAGAGGGCTCTTCAGCACATGGAAG
CTGGAAAGGGATAAACAGCCAAGTAGCTTCCAGCTCACAGCAGCCCGCAAACTTGGACCTGCCACCAGCTCCAGAGCTTG
ACTGGATGGAGACAGGACCATCTCTGACATTCATTGGCCATCAGGATATACCAGGAGTTGGTAACATCCACTCAGGTGCC
ACACCTCCCTGGATGATCCAAGATGAATACACTGCTGGGAACCAAGAAATAGGACCATCCTATGAAGAATTTCTTAAAGA
AAAGGAAAAACAGAAGTTGAAAAAACTCCCCCCAGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCAGTGCAG
GCTGGCTGCCCTCTTTTGGCCGCGTCTGGAATAATGGACGCCGCTGGCAGTCCAGACATCAATTCAAAACTGAAGCTGCA
GCAATGAAGAAGCAGTCACATACAGAAAAAAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .76 RPM |
| SRP007412_cerebellum | 4 .86 RPM |
| SRP007412_heart | 1 .11 RPM |
| SRP007412_kidney | 3 .78 RPM |
| SRP007412_liver | 3 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000186166 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023065 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007378 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004360 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1802 | 66.67 | 61.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003948 retrocopies