Parental gene: | CCDC84, ENSPTRG00000004360 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:116931443..116948904(+) |
>ENSPTRG00000004360
ATGGCGCCGGCGCAGCGCTGCCCTCTGTGCCGCCAGACCTTCTTCTGTGGTCGCGGGCACGTTTACAGCCGCAAGCACCA
GCGGCAGCTGAAGGAGGCTTTGGAGAGGCTCCTGCCCCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGG
AGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGAGGTGCGGGAACACCTGAGCCATGGA
AACCTGACGGTGCTGTACGGGGGGCTGCTGGAGCATCTGGCCAGCCCAGAGCACAAGAAAGCAACCAACAAATTCTGGTG
GGAGAACAAAGCTGAAGTCCAGATGAAAGAGAAGTTTCTGGTCACTCCCCAGGATTATGCGCGATTCAAGAAATCCATGG
TGAAAGGTTTGGATTCCTATGAAGAAAAGGAGGATGAAGTGATCAAGGAGATGGCAGCTCAGATCCGTGAGGTGGAGCAG
AGCCGACAGGAGGTGGTTCGGTCTGTCTTAGAGCCTCAGGCAGTGCCAGACCCAGAAGAGGGCTCTTCAGCACCTAGAAG
CTGGAAAGGGATGAACAGCCAAGTAGCTTCCAGCTTACAGCAGCCCTCAAATTTGGACCTGCCACCAGCTCCAGAGCTTG
ACTGGATGGAGACAGGACCATCTCTGACATTCATTGGCCATCAGGATATACCAGGAGTTGGTAACATCCACTCAGGTGCC
ACACCTCCCTGGATGATCCAAGATGAAGAATACATTGCTGGGAACCAAGAAATAGGACCATCCTATGAAGAATTTCTTAA
AGAAAAGGAAAAACAGAAGTTGAAAAAACTCCCCCCAGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCAGTG
CAGGCTGGCTGCCCTCTTTTGGCCGCGTCTGGAATAATGGACGCCGCTGGCAGTCCAGACATCAATTCAAAACTGAAGCT
GCAGCAATGAAGAAGCAGTCACATACAGAAAAAAGCTAA
ATGGCGCCGGCGCAGCGCTGCCCTCTGTGCCGCCAGACCTTCTTCTGTGGTCGCGGGCACGTTTACAGCCGCAAGCACCA
GCGGCAGCTGAAGGAGGCTTTGGAGAGGCTCCTGCCCCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGG
AGCGCTATGTGCCCGAACACGAGCGATGCTGCTGGTGCCTGTGCTGCGGCTGTGAGGTGCGGGAACACCTGAGCCATGGA
AACCTGACGGTGCTGTACGGGGGGCTGCTGGAGCATCTGGCCAGCCCAGAGCACAAGAAAGCAACCAACAAATTCTGGTG
GGAGAACAAAGCTGAAGTCCAGATGAAAGAGAAGTTTCTGGTCACTCCCCAGGATTATGCGCGATTCAAGAAATCCATGG
TGAAAGGTTTGGATTCCTATGAAGAAAAGGAGGATGAAGTGATCAAGGAGATGGCAGCTCAGATCCGTGAGGTGGAGCAG
AGCCGACAGGAGGTGGTTCGGTCTGTCTTAGAGCCTCAGGCAGTGCCAGACCCAGAAGAGGGCTCTTCAGCACCTAGAAG
CTGGAAAGGGATGAACAGCCAAGTAGCTTCCAGCTTACAGCAGCCCTCAAATTTGGACCTGCCACCAGCTCCAGAGCTTG
ACTGGATGGAGACAGGACCATCTCTGACATTCATTGGCCATCAGGATATACCAGGAGTTGGTAACATCCACTCAGGTGCC
ACACCTCCCTGGATGATCCAAGATGAAGAATACATTGCTGGGAACCAAGAAATAGGACCATCCTATGAAGAATTTCTTAA
AGAAAAGGAAAAACAGAAGTTGAAAAAACTCCCCCCAGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCAGTG
CAGGCTGGCTGCCCTCTTTTGGCCGCGTCTGGAATAATGGACGCCGCTGGCAGTCCAGACATCAATTCAAAACTGAAGCT
GCAGCAATGAAGAAGCAGTCACATACAGAAAAAAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .67 RPM |
| SRP007412_cerebellum | 10 .75 RPM |
| SRP007412_heart | 2 .54 RPM |
| SRP007412_kidney | 7 .90 RPM |
| SRP007412_liver | 5 .07 RPM |
| SRP007412_testis | 3 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000186166 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023065 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007378 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003948 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1416 | 68.27 | 61.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004360 retrocopies