Parental gene: | ENSPPYG00000008259 |
| Aliases: | None |
| Description: | Cytochrome c oxidase assembly protein COX11, mitochondrial [Source:UniProtKB/TrEMBL;Acc:H2NTL1] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:37297231..37308885(+) |
>ENSPPYG00000008259
ATGGGAGGACTCTGGCGTCCGGGATGGAGGCGCGTAGCTTTCTGTGGCTGGCGCTGGATCCACCCTGGGTCTCCAACCAG
GGCTGCAGAGAGGGTAGAGCCGTTTCTTAGGCCAGAGTGCAGTGGGACAGGAGGTGCCGGGAGAGGACTGAGGTGGCTTG
GGACATGGAAGCGCTGCAGCCTTGGAGCCCGGCATCCAGCATTGCAGCCGCCGCGGCGGCATAAGAACTCGAACCCTTTC
ACGCGCGCGCAGAAGGAGGAGTGGCGGCGGCGGAACAAGACGACCCTCACTTACGTGGCCGCTGTCGCCGTGGGCATGCT
TGGGGCGTCCTACGCTGCCGTACCCCTTTATCGGCTGTATTGCCAGACTACTGGACTTGGAGGATCAGCAGTTGCAGGTC
ATGCCTCAGACAAGATTGAAAACATGGTGCCTGTTAAAGATCGAATCATTAAAATTAGCTTTAATGCAGATGTGCATGCA
AGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATATGTGGTGCCAGGAGAGACTGCACTGGCGTTTTACAGAGC
TAAGAATCCTACTGACAAACCAGTAATTGGAATTTCTACATACAATATTGTTCCATTTGAAGCTGGACAGTATTTCAATA
AAATACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATTGAT
CCTGAATTTGCTGAAGATCCAAGAATGATTAAAGTTGATCTTATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGG
GCACAAGTTGCCAGTTCCAGGATATAATTCAAGTCAGCAACTAAGTCTTCCTTCAAAATTGTGA
ATGGGAGGACTCTGGCGTCCGGGATGGAGGCGCGTAGCTTTCTGTGGCTGGCGCTGGATCCACCCTGGGTCTCCAACCAG
GGCTGCAGAGAGGGTAGAGCCGTTTCTTAGGCCAGAGTGCAGTGGGACAGGAGGTGCCGGGAGAGGACTGAGGTGGCTTG
GGACATGGAAGCGCTGCAGCCTTGGAGCCCGGCATCCAGCATTGCAGCCGCCGCGGCGGCATAAGAACTCGAACCCTTTC
ACGCGCGCGCAGAAGGAGGAGTGGCGGCGGCGGAACAAGACGACCCTCACTTACGTGGCCGCTGTCGCCGTGGGCATGCT
TGGGGCGTCCTACGCTGCCGTACCCCTTTATCGGCTGTATTGCCAGACTACTGGACTTGGAGGATCAGCAGTTGCAGGTC
ATGCCTCAGACAAGATTGAAAACATGGTGCCTGTTAAAGATCGAATCATTAAAATTAGCTTTAATGCAGATGTGCATGCA
AGTCTCCAGTGGAACTTTAGACCTCAGCAAACAGAAATATATGTGGTGCCAGGAGAGACTGCACTGGCGTTTTACAGAGC
TAAGAATCCTACTGACAAACCAGTAATTGGAATTTCTACATACAATATTGTTCCATTTGAAGCTGGACAGTATTTCAATA
AAATACAGTGCTTCTGTTTTGAAGAACAAAGGCTTAATCCCCAAGAGGAAGTAGATATGCCAGTGTTTTTCTACATTGAT
CCTGAATTTGCTGAAGATCCAAGAATGATTAAAGTTGATCTTATCACTCTTTCTTACACTTTTTTTGAAGCAAAGGAAGG
GCACAAGTTGCCAGTTCCAGGATATAATTCAAGTCAGCAACTAAGTCTTCCTTCAAAATTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .81 RPM |
| SRP007412_cerebellum | 8 .63 RPM |
| SRP007412_heart | 6 .05 RPM |
| SRP007412_kidney | 20 .12 RPM |
| SRP007412_liver | 12 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000008482 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014862 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000001207 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000166260 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005225 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014855 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000020544 | ortholog_one2many | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007990 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000004138 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009422 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000046318 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_156 | 98.55 | 96.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2847 | 88.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008259 retrocopies