Parental gene: | SYNGR2, ENSPPYG00000008684 |
| Aliases: | None |
| Description: | synaptogyrin 2 [Source:HGNC Symbol;Acc:11499] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:68211739..68216479(+) |
>ENSPPYG00000008684
ATGGCGATTGGGGCCTACGGCGCGGCCAAGGCGGGCGGCTCCTTCGACTTGCGGCGCTTCCTGACGCAGCCGCAGGTGGT
GGCGCGCGCCGTGTGCTTGGTCTTCGCCTTGATCGTGTTCTCCTGCATCTATGGTGAGGGCTATAGCAACGCCCACGAGT
CTAAGCAGATGTACTGCGTGTTCAACCGCAACGAGGATGCCTGCCGCTATGGCAGTGCCATCGGGATGCTGGCCTTCCTG
GCCTCGGCCTTCTTCTTGGTGGTCGACGCATATTTCCCCCAGATCAGCAACGCCACCGACCGCAAGTACCTGGTCATTGG
TGACCTGCTCTTCTCAGCTCTCTGGACCTTCCTGTGGTTTGTTGGTTTCTGCTTCCTCACCAACCAGTGGGCGGTCACCA
ACCCGAAGGACGTGCTGGTGGGGGCCGACTCTGCGAGGGCAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGGT
GTGCTGGCCTCCCTGGCCTACCAGCGCTACAAGGCTGGCGTGGACGACTTCATCCAGAACTACGTCGACCCCACTCCGGA
CCCCAACACCGCCTACGCCTCCTACCCAGGTGCATCCGTGGACAACTACCAACAGCCACCCTTCACTCAGAATGCGGAGA
GCACCGAGGGCTACCAGCCGACCCTGTGTACTGAGTGGCGGTTAGGGTGGGAAGGGGGACAGAGAGGGCCCTCCCCTCTG
CCCTGGACTTTCCCGTGA
ATGGCGATTGGGGCCTACGGCGCGGCCAAGGCGGGCGGCTCCTTCGACTTGCGGCGCTTCCTGACGCAGCCGCAGGTGGT
GGCGCGCGCCGTGTGCTTGGTCTTCGCCTTGATCGTGTTCTCCTGCATCTATGGTGAGGGCTATAGCAACGCCCACGAGT
CTAAGCAGATGTACTGCGTGTTCAACCGCAACGAGGATGCCTGCCGCTATGGCAGTGCCATCGGGATGCTGGCCTTCCTG
GCCTCGGCCTTCTTCTTGGTGGTCGACGCATATTTCCCCCAGATCAGCAACGCCACCGACCGCAAGTACCTGGTCATTGG
TGACCTGCTCTTCTCAGCTCTCTGGACCTTCCTGTGGTTTGTTGGTTTCTGCTTCCTCACCAACCAGTGGGCGGTCACCA
ACCCGAAGGACGTGCTGGTGGGGGCCGACTCTGCGAGGGCAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGGT
GTGCTGGCCTCCCTGGCCTACCAGCGCTACAAGGCTGGCGTGGACGACTTCATCCAGAACTACGTCGACCCCACTCCGGA
CCCCAACACCGCCTACGCCTCCTACCCAGGTGCATCCGTGGACAACTACCAACAGCCACCCTTCACTCAGAATGCGGAGA
GCACCGAGGGCTACCAGCCGACCCTGTGTACTGAGTGGCGGTTAGGGTGGGAAGGGGGACAGAGAGGGCCCTCCCCTCTG
CCCTGGACTTTCCCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .51 RPM |
| SRP007412_cerebellum | 9 .12 RPM |
| SRP007412_heart | 22 .43 RPM |
| SRP007412_kidney | 57 .38 RPM |
| SRP007412_liver | 34 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000108639 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021864 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006834 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1220 | 87.85 | 86.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3487 | 79.03 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008684 retrocopies