Parental gene: | WDR45L, ENSPPYG00000008785 |
| Aliases: | WDR45B, WDR45L, WIPI3 |
| Description: | WD repeat domain phosphoinositide-interacting protein 3 [Source:RefSeq peptide;Acc:NP_001127514] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:72723212..72758885(-) |
>ENSPPYG00000008785
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAACT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTCGTGGACCTGGCCAGCACGGAGAAGCCACCCGTGGACATTCCTGCACACGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACCCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATTAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
ATGAACCTCCTGCCGTGTAACCCTCACGGCAACGGGCTGCTCTACGCCGGCTTCAACCAGGACCACGGATGCTTTGCGTG
TGGGATGGAAAATGGATTCCGAGTCTATAACACTGATCCACTAAAAGAAAAAGAGAAACAAGAATTTCTAGAAGGAGGAG
TTGGCCATGTTGAAATGTTATTTCGCTGCAACTATTTAGCTTTAGTTGGTGGTGGAAAAAAGCCGAAATACCCTCCCAAC
AAAGTAATGATCTGGGATGACCTGAAGAAGAAGACTGTTATTGAAATAGAATTTTCTACAGAAGTCAAGGCAGTCAAACT
GCGGCGAGATAGAATTGTGGTGGTTTTGGACTCCATGATTAAGGTGTTCACATTCACACACAATCCCCATCAGTTGCACG
TCTTCGAAACCTGCTATAACCCCAAAGGCCTCTGTGTCCTTTGTCCCAATAGTAACAACTCCCTCCTGGCCTTTCCGGGC
ACGCACACGGGCCATGTGCAGCTCGTGGACCTGGCCAGCACGGAGAAGCCACCCGTGGACATTCCTGCACACGAGGGTGT
CCTGAGCTGCATTGCACTCAACCTGCAGGGAACAAGAATTGCAACTGCATCCGAGAAAGGGACCCTTATAAGAATATTTG
ATACTTCATCAGGGCATTTAATCCAGGAACTGCGAAGAGGATCTCAAGCAGCCAATATTTACTGCATTAACTTCAATCAG
GATGCGTCCCTCATCTGCGTATCCAGCGACCACGGCACAGTGCATATTTTTGCAGCTGAAGATCCAAAAAGGAATAAACA
GTCCAGTTTGGCCTCAGCCAGTTTCCTTCCAAAATACTTCAGTTCCAAGTGGAGTTTCTCCAAGTTTCAGGTTCCCTCAG
GCTCTCCGTGCATTTGTGCCTTTGGAACAGAGCCAAACGCCGTCATTGCAATTTGTGCAGACGGCAGCTACTACAAATTC
CTGTTCAACCCCAAGGGGGAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAAGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 45 .78 RPM |
| SRP007412_cerebellum | 40 .49 RPM |
| SRP007412_heart | 12 .01 RPM |
| SRP007412_kidney | 35 .20 RPM |
| SRP007412_liver | 14 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005657 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000141580 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006132 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013344 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021803 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000025173 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010516 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020333 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009807 | ortholog_one2many | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006212 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_150 | 93.02 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1559 | 77.48 | 75.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008785 retrocopies