Parental gene:

RALBP1, ENSPPYG00000009010

Aliases:None
Description:ralA binding protein 1 [Source:HGNC Symbol;Acc:9841]
Organism:Orangutan (Pongo abelii)
Coordinates:18:22646814..22709240(-)


>ENSPPYG00000009010
ATGACTGAGTGCTTCCTGCCCCCCACCAGCAGCCCCAGTGAACACCGCAGGGTGGAGCATGGCAGCGGGCTTACCCGGAC
CCCCAGCTCTGAAGAGATCAGCCCTACTAAGTTTCCTGGATTGTACCGCACTGGCGAGCCCTCGCCTCCCCATGACACCC
TCCATGAGCCTCCTGATGTAGTGTCTGATGATGAGAAAGACCATGGGAAGAAAAAAGGGAAATTTAAGAAAAAGGAAAAG
AGGACTGAAGGCTATGCAGCCTTTCAGGAAGATAGCTCTGGAGATGAGGCAGAAAGTCCTTCTAAAATGAAGAGGTCCAA
GGGAATCCATGTTTTCAAGAAGCCCAGCTTTTCTAAAAAGAAGGAAAAGGATTTTAAAATAAAAGAGAAACCCAAAGAAG
AAAAGCATAAAGAAGAAAAGCACAAAGAAGAAAAACATAAAGAGAAGAAGTCGAAAGACTTGACAGCAGCTGATGTTGTT
AAACAGTGGAAGGAAAAGAAGAAAAAGAAAAAGCCAATTCAGGAGCCAGAGGTGCCTCAGATTGATGTTCCAAATCTCAA
ACCCATTTTTGGAATTCCTTTGGCTGATGCAGTAGAGAGGACCATGATGTATGATGGCATTCGGCTGCCAGCCGTTTTCC
GTGAATGTATAGATTACGTAGAGAAGTATGGCATGAAGTGTGAAGGCATCTACAGAGTATCAGGAATTAAATCAAAGGTG
GATGAGCTAAAAGCAGCCTATGACCGGGAGGAGTCTACAAACTTGGAAGACTATGAGCCTAACACTGTAGCCAGTTTGCT
GAAGCAGTATTTGCGAGACCTTCCAGAGAATTTGCTTACCAAAGAGCTTATGCCCAGATTTGAAGAGGCTTGTGGGAGGA
CCACGGAGGCTGAGAAAGTGCAGGAATTCCAGCGTTTACTCAAAGAACTGCCAGAATGTAACTATCTTCTGATTTCTTGG
CTCATTGTGCACATGGACCATGTCATCGCAAAGGAACTGGAAACAAAAATGAATATACAGAACATTTCTATAGTGCTCAG
CCCAACTGTGCAGATCAGCAATCGAGTCCTGTATGTGTTTTTCACACATGTGCAAGAACTCTTTGGAAATGTGGTACTAA
AGCAAGTGATGAAACCTCTGCGATGGTCTAACATGGCCACGATGCCCACGCTGCCAGAGACCCAGGCGGGCATCAAGGAG
GAGATCAGGAGACAGGAGTTTCTTTTGAATTGTTTACATCGAGATCTGCAGGGTGGAATAAAGGATTTGTCTAAAGAAGA
AAGATTATGGGAAGTACAAAGAATTTTGACAGCCCTCAAAAGAAAACTGAGAGAAGCTAAAAGACAGGAGTGTGAAACCA
AGATTGCACAAGAGATAGCCAGTCTTTCAAAAGAGGATGTTTCCAAAGAAGAGATGAATGAAAATGAAGAAGTTATAAAT
ATTCTCCTTGCTCAGGAGAATGAGATCCTGACTGAACAGGAGGAGCTCCTGGCCATGGAGCAGTTTCTGCGCCGGCAGAT
TGCCTCAGAAAAAGAAGAGATTGAACGCCTCAGAGCTGAGATTGCTGAAATTCAGAGTCGCCAGCAGCACGGCCGAAGTG
AGACTGAGGAGTACTCCTCCGAGAGCGAGAGCGAGAGTGAGGATGAGGAGGAGCTGCAGATCATTCTGGAAGACTTACAG
AGACAGAATGAAGAGCTGGAAATAAAGAACAATCATTTGAATCAAGCAATTCATGAGGAGCGCGAGGCCATCATCGAGCT
GCGCGTGCAGCTGCGGCTGCTCCAGATGCAGCGAGCCAAGGCCGAGCAGCAGGCGCAGGAGGATGAGGAGCCTGAGTGGC
GCGGGGGTGCCGTCCAGCCGCCCAGAGACGGCGTCCTCGAGCCAAAAGCAGCTAAAGAGCAGCCAAAGGCAGGCAAGGAG
CCGGCAAAGCCATCGCCCAGCAGGGATAGGAAGGAGACGTCCATCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 83 .32 RPM
SRP007412_cerebellum 65 .79 RPM
SRP007412_heart 42 .57 RPM
SRP007412_kidney 62 .61 RPM
SRP007412_liver 24 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000017797 ortholog_one2one 2 retrogenes
retro_hsap_2129, retro_hsap_2734,
Gorilla gorilla ENSGGOG00000023120 ortholog_one2one 1 retrogene
retro_ggor_1903,
Macaca mulatta ENSMMUG00000019521 ortholog_one2one 2 retrogenes
retro_mmul_1000, retro_mmul_1528,
Nomascus leucogenys ENSNLEG00000006950 ortholog_one2one 1 retrogene
retro_nleu_2532,
Pan troglodytes ENSPTRG00000009859 ortholog_one2one 2 retrogenes
retro_ptro_1558, retro_ptro_1848,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1922 88.38 67.02
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2. retro_pabe_2273 84.25 77.25
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Download FASTA sequences of all ENSPPYG00000009010 retrocopies