Parental gene: | RPRD1A, ENSPPYG00000009111 |
| Aliases: | RPRD1A, P15RS |
| Description: | Regulation of nuclear pre-mRNA domain-containing protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q5R8Y3] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 18:48106563..48186117(-) |
>ENSPPYG00000009111
ATGTCAGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCTTGTC
CCTGTGGCTCATTCACCATCGTAAACACTCGCGGCCCATCGTCACCGTGTGGGAGCGGGAGCTGCGGAAAGCCAAACCAA
ACAGGAAGCTTACTTTTCTCTACCTAGCCAATGATGTCATACAGAACAGCAAGAGGAAGGGTCCAGAGTTTACAAAAGAT
TTTGCACCAGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGT
GTTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAACAACTTAAACAAGCTCTGTATGGTGATAAGA
AGCCTAGGAAGCGAACTTACGAACAGATAAAGGTGGATGAAAATGAAAACTGTTCCTCTCTGGGATCTCCAAGTGAACCA
CCACAGACTCTAGATCTCGTTAGAGCATTACAAGATCTAGAAAATGCAGCCTCAGGTGATGCAGCAGTTCATCAGAGGAT
AGCTTCTTTACCTGTTGAAGTCCAAGAAGTATCTCTGTTAGATAAAATAACAGATAAAGAATCTGGAGAAAGGCTTTCCA
AAATGGTAGAGGATGCGTGTATGTTGCTGGCAGATTACAATGGCAGATTGGCGGCAGAAATAGATGATAGAAAGCAACTC
ACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGAGTACAAGCG
CAAGCTAGCCAGAGTTTCCCTGGTGCGCAAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGACTTATCTCGATTGCCCA
ATGTCACTGGCAGCCACATGCACCTGCCGTTTGCGGGAGACATCTACAGTGAAGATTGA
ATGTCAGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCTTGTC
CCTGTGGCTCATTCACCATCGTAAACACTCGCGGCCCATCGTCACCGTGTGGGAGCGGGAGCTGCGGAAAGCCAAACCAA
ACAGGAAGCTTACTTTTCTCTACCTAGCCAATGATGTCATACAGAACAGCAAGAGGAAGGGTCCAGAGTTTACAAAAGAT
TTTGCACCAGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGT
GTTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAACAACTTAAACAAGCTCTGTATGGTGATAAGA
AGCCTAGGAAGCGAACTTACGAACAGATAAAGGTGGATGAAAATGAAAACTGTTCCTCTCTGGGATCTCCAAGTGAACCA
CCACAGACTCTAGATCTCGTTAGAGCATTACAAGATCTAGAAAATGCAGCCTCAGGTGATGCAGCAGTTCATCAGAGGAT
AGCTTCTTTACCTGTTGAAGTCCAAGAAGTATCTCTGTTAGATAAAATAACAGATAAAGAATCTGGAGAAAGGCTTTCCA
AAATGGTAGAGGATGCGTGTATGTTGCTGGCAGATTACAATGGCAGATTGGCGGCAGAAATAGATGATAGAAAGCAACTC
ACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGAGTACAAGCG
CAAGCTAGCCAGAGTTTCCCTGGTGCGCAAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGACTTATCTCGATTGCCCA
ATGTCACTGGCAGCCACATGCACCTGCCGTTTGCGGGAGACATCTACAGTGAAGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 79 .18 RPM |
| SRP007412_cerebellum | 81 .23 RPM |
| SRP007412_heart | 19 .18 RPM |
| SRP007412_kidney | 20 .42 RPM |
| SRP007412_liver | 12 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000007025 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007369 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018777 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000399 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006228 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009974 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000001641 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1352 | 73.40 | 59.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000009111 retrocopies