Parental gene: | CHMP2A, ENSPPYG00000010511 |
| Aliases: | None |
| Description: | charged multivesicular body protein 2A [Source:HGNC Symbol;Acc:30216] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:60686705..60689385(-) |
>ENSPPYG00000010511
ATGGACCTGTTGTTCGGGCGCCGGAAGACGCCAGAGGAGCTACTGCGGCAGAACCAGAGGGCCCTGAACCGTGCCATGCG
GGAGCTGGACCGCGAGCGGCAGAAACTAGAGACCCAGGAGAAGAAAATCATTGCAGACATCAAGAAGATGGCCAAGCAAG
GCCAGATGGATGCTGTTCGCATCATGGCAAAAGACTTGGTGCGCACCCGGCGCTATGTGCGCAAGTTTGTATTGATGCGG
GCCAACATCCAGGCTGTGTCCCTCAAGATCCAGACACTCAAGTCCAACAACTCAATGGCACAAGCCATGAAGGGTGTCAC
CAAGGCCATGGGCACCATGAACAGACAGCTGAAGTTGCCCCAGATCCAGAAGATCATGATGGAGTTTGAGCGGCAGGCAG
AGATCATGGATATGAAGGAGGAGATGATGAATGATGCCATTGATGATGCCATGGGTGATGAAGAAGATGAAGAGGAGAGT
GATGCTGTTGTGTCCCAGGTCCTGGATGAGCTGGGACTTAGCCTAACAGATGAGCTGTCAAATCTCCCCTCAACTGGGGG
CTCGCTTAGTGTGGCTGCTGGTGGGAAAAAAGCAGAGGCCACAGCCTCAGCCCTAGCTGATGCTGATGCAGACCTGGAGG
AACGGCTTAAGAACCTGCGGAGGGACTGA
ATGGACCTGTTGTTCGGGCGCCGGAAGACGCCAGAGGAGCTACTGCGGCAGAACCAGAGGGCCCTGAACCGTGCCATGCG
GGAGCTGGACCGCGAGCGGCAGAAACTAGAGACCCAGGAGAAGAAAATCATTGCAGACATCAAGAAGATGGCCAAGCAAG
GCCAGATGGATGCTGTTCGCATCATGGCAAAAGACTTGGTGCGCACCCGGCGCTATGTGCGCAAGTTTGTATTGATGCGG
GCCAACATCCAGGCTGTGTCCCTCAAGATCCAGACACTCAAGTCCAACAACTCAATGGCACAAGCCATGAAGGGTGTCAC
CAAGGCCATGGGCACCATGAACAGACAGCTGAAGTTGCCCCAGATCCAGAAGATCATGATGGAGTTTGAGCGGCAGGCAG
AGATCATGGATATGAAGGAGGAGATGATGAATGATGCCATTGATGATGCCATGGGTGATGAAGAAGATGAAGAGGAGAGT
GATGCTGTTGTGTCCCAGGTCCTGGATGAGCTGGGACTTAGCCTAACAGATGAGCTGTCAAATCTCCCCTCAACTGGGGG
CTCGCTTAGTGTGGCTGCTGGTGGGAAAAAAGCAGAGGCCACAGCCTCAGCCCTAGCTGATGCTGATGCAGACCTGGAGG
AACGGCTTAAGAACCTGCGGAGGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 40 .80 RPM |
| SRP007412_cerebellum | 28 .21 RPM |
| SRP007412_heart | 24 .20 RPM |
| SRP007412_kidney | 60 .39 RPM |
| SRP007412_liver | 36 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000013531 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000033916 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005628 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_196 | 97.30 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000010511 retrocopies