Parental gene: | PCGF1, ENSPPYG00000012270 |
| Aliases: | None |
| Description: | polycomb group ring finger 1 [Source:HGNC Symbol;Acc:17615] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2a:36192720..36195719(+) |
>ENSPPYG00000012270
ATGGCGTCTCCTCAGGGGGGCCAGATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCC
GCTACGGAACGAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT
TCGTGGATGCCACCACCATCACAGAGTGTCTTCATACTTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAG
TATTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACAT
CGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAAGAGAAACGGATTCGGGAATTCTACCAGTCCCGAGGTTTGGACC
GGGTCACCCAGCCCAGTGGGGAAGAGCCAGCACTGAGTAACCTCGGCCTCCCCTTCAGCAGCTTTGACCACTCTAAAGCC
CACTACTATCGCTATGATGAGCAGCTGAACCTGTGCCTGGAGCGGCTGAGTTCTGGCAAAGACAAGAATAAAAGCGTCCT
GCAGAACAAGTATGTCCGATGTTCTGTTAGAGCTGAGGTACGCCATCTCCGGAGGGTCCTGTGTCACCGCTTGATGCTAA
ACCCTCAGCATGTGCAGCTCCTTTTTGACAATGAAGTTCTCCCTGATCACATGACAATGAAGCAGATATGGCTCTCCCGC
TGGTTCGGCAAGCCATCCCCTTTGCTTTTACAATACAGTGTGAAAGAGAAGAGGAGGTAG
ATGGCGTCTCCTCAGGGGGGCCAGATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCC
GCTACGGAACGAGGAGGAGGTTCGAGTGAAGATCAAAGACTTGAATGAACACATTGTTTGCTGCCTATGCGCCGGCTACT
TCGTGGATGCCACCACCATCACAGAGTGTCTTCATACTTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACTAGCAAG
TATTGCCCCATGTGCAACATTAAGATCCACGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACAT
CGTGTATAAGCTGGTGCCTGGCTTGCAAGACAGTGAAGAGAAACGGATTCGGGAATTCTACCAGTCCCGAGGTTTGGACC
GGGTCACCCAGCCCAGTGGGGAAGAGCCAGCACTGAGTAACCTCGGCCTCCCCTTCAGCAGCTTTGACCACTCTAAAGCC
CACTACTATCGCTATGATGAGCAGCTGAACCTGTGCCTGGAGCGGCTGAGTTCTGGCAAAGACAAGAATAAAAGCGTCCT
GCAGAACAAGTATGTCCGATGTTCTGTTAGAGCTGAGGTACGCCATCTCCGGAGGGTCCTGTGTCACCGCTTGATGCTAA
ACCCTCAGCATGTGCAGCTCCTTTTTGACAATGAAGTTCTCCCTGATCACATGACAATGAAGCAGATATGGCTCTCCCGC
TGGTTCGGCAAGCCATCCCCTTTGCTTTTACAATACAGTGTGAAAGAGAAGAGGAGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .26 RPM |
| SRP007412_cerebellum | 11 .55 RPM |
| SRP007412_heart | 5 .30 RPM |
| SRP007412_kidney | 10 .47 RPM |
| SRP007412_liver | 7 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000115289 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000069678 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000752 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012094 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007319 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008277 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_862 | 83.46 | 50.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012270 retrocopies