Parental gene:

ENSSSCG00000008277

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:3:71865749..71868190(+)


>ENSSSCG00000008277
ATGGCGTCTCCTCAGGGGGGCCAGATTGCGATCGCGATGAGGCTTCGGAACCAGCTCCAGTCAGTGTACAAGATGGACCG
CTACGGAACGAGGGAGGAGGTTCGAGTAAAGATCAAAGACTTGAATGAACACATCGTCTGCTGCTTGTGCGCAGGATACT
TCGTGGATGCCACTACCATCACTGAGTGTCTTCATACGTTCTGCAAGAGTTGTATTGTGAAGTACCTCCAAACCAGCAAG
TACTGCCCCATGTGCAACATCAAGATCCATGAGACACAGCCACTGCTCAACCTCAAACTGGACCGGGTCATGCAGGACAT
CGTGTACAAGCTAGTGCCAGGCTTGCAAGACAGTGAAGAGAAACGGATCCGAGAATTCTACCAGTCCCGAGGCTTGGACA
GGATCACTCAGCCCAGTGGGGAAGAGCCAGCCCTGAGCAACCTCGGCCTCCCCTTCAGCAGTTTCGACCACTCAAAAGCC
CACTACTATCGCTATGATGAGCAGCTAAGCCTATGCCTGGAGCGGCTGAGTTCTGGCAAAGACAAGAATAAAAGCGTCCT
GCAGAACAAATATGTGCGATGTTCTGTTAGAGCTGAGGTTCGCCATCTCCGGAAAGTCCTCTGTCACCGCTTGATGCTAA
GTCCCCAGCATGTGCAGCTCCTTTTTGACAATGAAGTTCTCCCTGATCACATGACCATGAAGCAGATATGGCTCTCCCGC
TGGTTCGGCAAGCCATCTCCTTTGCTTTTACAATACAGTGTGAAAGAGAAGAGGAGGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 1 .46 RPM
SRP014902_testis 1 .56 RPM
SRP018288_heart 0 .89 RPM
SRP018288_kidney 2 .56 RPM
SRP018288_liver 2 .88 RPM
SRP018288_lung 5 .19 RPM
SRP018856_adipose 4 .36 RPM
SRP035408_brain 1 .91 RPM
SRP035408_liver 0 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000115289 ortholog_one2many 1 retrogene
retro_hsap_1029,
Mus musculus ENSMUSG00000069678 ortholog_one2many 1 retrogene
retro_mmus_2722,
Nomascus leucogenys ENSNLEG00000000752 ortholog_one2many 1 retrogene
retro_nleu_907,
Pongo abelii ENSPPYG00000012270 ortholog_one2many 1 retrogene
retro_pabe_862,
Pan troglodytes ENSPTRG00000012094 ortholog_one2many 1 retrogene
retro_ptro_704,
Sorex araneus ENSSARG00000007319 ortholog_one2many 1 retrogene
retro_sara_448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1069 90.80 95.37
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Download FASTA sequences of all ENSSSCG00000008277 retrocopies