Parental gene: | IDH1, ENSPPYG00000013125 |
| Aliases: | None |
| Description: | Isocitrate dehydrogenase [NADP] cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q5R9C5] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:99772627..99790965(-) |
>ENSPPYG00000013125
ATGTCCAAAAAAATCAGTGGCGGTTCTGTGGTAGAGATGCAAGGAGATGAAATGACACGAATCATTTGGGAACTGATTAA
AGAGAAACTCATTTTTCCCTACGTGGAATTGGATCTACATAGCTATGATTTAGGCATAGAGAATCGTGATGCCACCAACG
ACCAAGTCACCAAGGATGCTGCAGAAGCTATAAAGAAGTATAATGTTGGCGTCAAATGTGCCACTATCACTCCTGATGAG
AAGAGGGTTGAGGAGTTCAAGTTGAAACAAATGTGGAAATCACCAAATGGTACCATACGAAATATTCTGGGTGGCACAGT
CTTCAGAGAAGCCATTATCTGCAAAAATATCCCCCGGCTTGTGAGTGGATGGGTAAAACCTATCATCATAGGTCGTCATG
CTTATGGGGATCAATACAGAGCAACTGATTTTGTTGTTCCTGGGCCTGGAAAAGTAGAGATAACCTACACACCAAGTGAC
GGAACCCAAAAGGTGACATACCTGGTACATAACTTTGAAGAGGGTGGTGGTGTTGCCATGGGGATGTATAATCAAGATAA
GTCAATTGAAGATTTTGCACACAGTTCCTTCCAAATGGCTCTGTCTAAGGGTTGGCCTTTGTATCTGAGCACCAAAAACA
CTATTCTGAAGAAATATGATGGGCGTTTTAAAGACATCTTTCAGGAAATATATGACAAGCAGTACAAGTCCCAATTTGAA
GCACGAAAGATCTGGTATGAGCATAGGCTCATCGACGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTG
GGCCTGTAAAAACTATGATGGTGACGTGCAGTCAGACTCTGTGGCCCAAGGGTATGGCTCTCTCGGCATGATGACCAGCG
TGCTGGTTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCACTACCGCATGTACCAG
AAAGGACAGGAGACGTCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGGTTAGCCCACAGAGCAAAGCTTGA
TAACAATAAAGAGCTTGCCTTCTTTGCAAATGCTTTGGAAGAAGTCTCTGTTGAGACAATTGAGGCTGGCTTCATGACCA
AGGACTTGGCTGCTTGCATTAAAGGTTTACCCAATGTGCAACGTTCTGACTACTTGAATACATTTGAGTTCATGGATAAA
CTTGGAGAAAACTTGAAGATCAAACTAGCTCAGGCCAAACTTTAA
ATGTCCAAAAAAATCAGTGGCGGTTCTGTGGTAGAGATGCAAGGAGATGAAATGACACGAATCATTTGGGAACTGATTAA
AGAGAAACTCATTTTTCCCTACGTGGAATTGGATCTACATAGCTATGATTTAGGCATAGAGAATCGTGATGCCACCAACG
ACCAAGTCACCAAGGATGCTGCAGAAGCTATAAAGAAGTATAATGTTGGCGTCAAATGTGCCACTATCACTCCTGATGAG
AAGAGGGTTGAGGAGTTCAAGTTGAAACAAATGTGGAAATCACCAAATGGTACCATACGAAATATTCTGGGTGGCACAGT
CTTCAGAGAAGCCATTATCTGCAAAAATATCCCCCGGCTTGTGAGTGGATGGGTAAAACCTATCATCATAGGTCGTCATG
CTTATGGGGATCAATACAGAGCAACTGATTTTGTTGTTCCTGGGCCTGGAAAAGTAGAGATAACCTACACACCAAGTGAC
GGAACCCAAAAGGTGACATACCTGGTACATAACTTTGAAGAGGGTGGTGGTGTTGCCATGGGGATGTATAATCAAGATAA
GTCAATTGAAGATTTTGCACACAGTTCCTTCCAAATGGCTCTGTCTAAGGGTTGGCCTTTGTATCTGAGCACCAAAAACA
CTATTCTGAAGAAATATGATGGGCGTTTTAAAGACATCTTTCAGGAAATATATGACAAGCAGTACAAGTCCCAATTTGAA
GCACGAAAGATCTGGTATGAGCATAGGCTCATCGACGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTG
GGCCTGTAAAAACTATGATGGTGACGTGCAGTCAGACTCTGTGGCCCAAGGGTATGGCTCTCTCGGCATGATGACCAGCG
TGCTGGTTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCACTACCGCATGTACCAG
AAAGGACAGGAGACGTCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGGTTAGCCCACAGAGCAAAGCTTGA
TAACAATAAAGAGCTTGCCTTCTTTGCAAATGCTTTGGAAGAAGTCTCTGTTGAGACAATTGAGGCTGGCTTCATGACCA
AGGACTTGGCTGCTTGCATTAAAGGTTTACCCAATGTGCAACGTTCTGACTACTTGAATACATTTGAGTTCATGGATAAA
CTTGGAGAAAACTTGAAGATCAAACTAGCTCAGGCCAAACTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .54 RPM |
| SRP007412_cerebellum | 15 .20 RPM |
| SRP007412_heart | 34 .41 RPM |
| SRP007412_kidney | 172 .33 RPM |
| SRP007412_liver | 148 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020527 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004574 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013587 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138413 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012619 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000009797 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016077 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007143 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014848 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000012865 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000023264 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_926 | 96.20 | 95.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2935 | 88.79 | 51.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000013125 retrocopies