Parental gene: | IFT80, ENSPPYG00000014255 |
| Aliases: | None |
| Description: | intraflagellar transport 80 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29262] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:163519593..163649850(-) |
>ENSPPYG00000014255
ATGAGACTAAAGATATCTCTTTTAAAAGAACCAAAGCATCAAGAATTAGTAAGCTGTGTGGGCTGGACTACTGCTGAAGA
GCTGTATTCATGTAATGATGATCACCAGATAGTGAAGTGGAACTTGTTAACCAGTGAAACAACTCAAATAGTAAAGCTTC
CTGATGATATTTACCCTATTGATTTTCACTGGTTCCAGAAAAGTTTGGGTGTAAAGAAACAAACCCAGGCAGAAAGCTTT
GTCCTCACAAGTTCTGATGGTAAATTTCATCTGATTTCCAAGTTAGGAAGAGTGGAAAAAAGTGTAGAAGCTCACTGTGG
AGCAGTACTTGCAGGAAGATGGAATTATGAAGGAACAGCATTAGTTACAGTTGGAGAAGATGGACAAATAAAAATTTGGT
CAAAGACTGGGATGCTTAGATCAACTTTAGCTCAGCAAGGAACACCAGTGTATTCAGTAGCGTGGGGCCCTGATTCAGAA
AAGGTTCTTTATACAGCAGGCAAGCAGCTAATCATTAAACCTCTTCAACCAAATGCTAAAGTTTTACAGTGGAAAGCTCA
TGATGGCATTATTTTAAAAGTAGATTGGAACTCAGTCAATGATCTTATTTTATCTGCTGGTGAAGACTGTAAATATAAGG
TATGGGATAGTTACGGCCGCCCACTGTACAATTCACAACCTCATGAGCATCCTATTACTTCAGTTGCCTGGGCTCCAGAT
GGAGAATTATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTGTGATAAAACTGGGTGGTCATATGCATTAGAAAAACC
CAACACTGGCAGCATATTTAATATTGCATGGTCTATTGATGGCACTCAGATTGCTGGAGCCTGTGGAAATGGACATGTTG
TTTTTGCACATGTGGTGGAACAACACTGGGAATGGAAAAATTTTCAAGTAACATTAACTAAAAGAAGGGCCATGCAGGTT
CGTAATGTTCTTAATGATGCAGTGGATTTACTGGAATTCCGTGATAGAGTCATTAAAGCATCTTTGAACTATGCACACTT
AGTTGTTTCAACGTCTCTTCAATGTTACGTGTTCTCCACGAAGAACTGGAACACACCAATTATATTTGATCTCAAAGAAG
GAACTGTTAGTTTAATTCTGCAGGCAGAAAGACATTTTCTTCTTGTAGATGGTAGTAGTATCTATTTATATTCATATGAA
GGGCGCTTTATTTCATCTCCAAAATTTCCTGGAATGAGAACAGATATTCTGAATGCACAGACTGTATCTTTGAGTAATGA
TACCATAGCAATAAGAGACAAAGCTGATGAAAAAATAATCTTCCTCTTTGAGGCATCAACTGGAAAGCCGTTAGGTGATG
GAAAGTTTCTTTCTCATAAGAATGAAATCTTGGAAATTGCTCTGGATCAAAAAGGACTTACCAATGATAGAAAAATTGCT
TTCATTGATAAAAATAGAGATCTGTGTATCACTTCTGTGAAACGATTTGGGAAGGAAGAACAAATTATCAAGCTTGGAAC
AATGGTGCATACTTTGGCATGGAACGATACATGCAATATCCTTTGTGGACTTCAAGATACTCGATTTATAGTGTGGTATT
ACCCCAATACAGTTTATGTGGACAGAGACATTTTGCCTAAAACATTATATGAAAGGGATGCAAGTGAATTTAGTAAAAAT
CCCCATATTGTGAGTTTTGTTGGAAATCAAGTAACTATTAGAAGAGCTGATGGCTCCCTGGTTCACATCAGCATATCACC
ATATCCTGCTATTCTCCATGAATATGTAAGCAGTTCAAAATGGGAAGATGCTGTAAGACTTTGTCGCTTTGTTAAGGAGC
AAACCATGTGGGCTTGTCTAGCTGCTATGGCAGTTGCTAATCGAGATATGACTACTGCAGAAATAGCCTATGCAGCAATT
GGTGAAATTGATAAGGTTCAGTACATCAATTCTATAAAAAATCTTCCATCTAAAGAATCAAAAATGGCCCACATACTACT
GTTTAGTGGGAACATACAGGAGGCTGAAATAGTACTTCTTCAGGCTGGCCTTGTTTATCAAGCAATCCAGATCAATATTA
ATCTCTACAACTGGGAAAGGGCACTGGAATTGGCTGTAAAATACAAAACACATGTTGATACAGTTCTTGCTTACCGTCAA
AAGTTTTTGGAGACATTTGGTAAACAGGAAACTAATAAACGATACTTGCATTATGCAGAAGGTCTCCAAATAGATTGGGA
GAAAATCAAAGCCAAAATTGAGATGGAAATTACAAAAGAAAGAGAGCAATCATCAAGCAGCCAATCCAGCAAGAGTATGG
GTTTAAAGCCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .73 RPM |
| SRP007412_cerebellum | 10 .82 RPM |
| SRP007412_heart | 3 .73 RPM |
| SRP007412_kidney | 6 .93 RPM |
| SRP007412_liver | 1 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000068885 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017282 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015578 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1294 | 75.11 | 56.50 | Please wait, loading  |
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Download FASTA sequences of all ENSPPYG00000014255 retrocopies