Parental gene: | IFT80, ENSPTRG00000015578 |
| Aliases: | None |
| Description: | intraflagellar transport 80 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29262] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:164039077..164168266(-) |
>ENSPTRG00000015578
ATGAGACTAAAGATATCTCTTTTAAAAGAACCAAAACATCAAGAATTAGTAAGCTGTGTGGGCTGGACTACTGCTGAAGA
GCTGTATTCATGTAGTGATGATCACCAGATAGTGAAGTGGAACTTGTTAACCAGTGAAACAACTCAAATAGTAAAGCTTC
CTGATGATATTTACCCTATTGATTTTCACTGGTTTCCAAAAAGTTTGGGTGTAAAGAAACAAACCCAGGCAGAAAGCTTT
GTCCTCACAAGTTCTGATGGTAAATTTCATCTGATTTCCAAGTTAGGAAGAGTGGAAAAAAGTGTAGAAGCTCACTGTGG
AGCAGTACTTGCAGGAAGATGGAATTATGAAGGAACAGCATTAGTTACAGTTGGAGAAGATGGACAAATAAAAATTTGGT
CAAAGACTGGGATGCTTAGATCAACTTTAGCTCAGCAAGGAACACCAGTGTATTCAGTAGCGTGGGGCCCTGATTCAGAA
AAGGTTCTTTATACAGCAGGCAAGCAGCTAATCATTAAACCTCTTCAACCAAATGCTAAAGTTTTGCAGTGGAAAGCTCA
TGATGGCATTATTTTAAAAGTAGATTGGAACTCAGTCAATGACCTTATTTTATCTGCTGGTGAAGACTGTAAATATAAGG
TATGGGATAGTTACGGCCGCCCACTGTACAATTCACAACCTCATGAGCATCCCATTACTTCAGTTGCCTGGGCTCCAGAT
GGAGAATTATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTGTGATAAAACTGGGTGGTCATATGCATTAGAAAAACC
CAACACTGGCAGCATATTTAATATTGCATGGTCTATCGATGGCACTCAGATTGCTGGAGCCTGTGGAAATGGACATGTTG
TTTTTGCACATGTGGTGGAACAACATTGGGAGTGGAAGAATTTTCAAGTAACATTAACTAAAAGAAGGGCCATGCAGGTT
CGTAATGTTCTTAATGATGCAGTGGATTTACTGGAATTCCGTGATAGAGTCATTAAAGCATCTTTGAACTATGCACACTT
AGTTGTTTCAACGTCTCTTCAATGTTACGTGTTCTCCACGAAGAACTGGAACACACCAATTATATTTGATCTCAAAGAAG
GAACTGTTAGTTTGATTCTGCAGGCAGAAAGACATTTTCTTCTTGTAGATGGTAGTAGTATCTATTTATATTCATATGAA
GGGCGCTTTATTTCATCTCCAAAATTTCCTGGAATGAGAACAGATATTCTGAACGCACAGACTGTGTCTTTGAGTAATGA
TACCATAGCAATAAGAGACAAAGCTGATGAAAAAATAATCTTCCTCTTTGAGGCATCAACTGGAAAGCCGTTAGGTGATG
GAAAGTTTCTTTCTCATAAGAATGAAATCTTGGAAATTGCTCTGGATCAAAAAGGACTTACCAATGATAGAAAAATTGCT
TTCATTGATAAAAATAGAGATCTCTGTATCACTTCTGTGAAACGATTTGGGAAGGAAGAACAAATTATCAAGCTTGGAAC
AATGGTGCATACTTTGGCATGGAACGATACATGCAATATCCTTTGTGGACTTCAAGATACTCGATTTATAGTGTGGTATT
ACCCCAATACAGTTTATGTGGACAGAGACATTTTGCCTAAAACATTATATGAAAGGGATGCAAGTGAATTTAGTAAAAAT
CCCCATATTGTGAGTTTTGTTGGAAATCAAGTAACTATTAGAAGAGCTGATGGCTCCCTGGTTCACATCAGCATATCACC
ATATCCTGCTATTCTCCATGAATATGTAAGCAGTTCAAAATGGGAAGATGCTGTAAGACTTTGTCGCTTTGTTAAGGAGC
AAACCATGTGGGCTTGTCTAGCTGCTATGGCAGTTGCTAATCGAGATATGACTACTGCAGAAATAGCCTATGCAGCAATT
GGTGAAATTGATAAGGTTCAGTACATCAATTCTATAAAAAATCTTCCATCTAAAGAATCAAAAATGGCCCACATACTACT
GTTTAGTGGGAACATACAGGAGGCTGAAATAGTACTTCTTCAGGCTGGCCTTGTTTATCAAGCAATCCAGATCAATATTA
ATCTCTACAACTGGGAAAGGGCACTGGAATTGGCTGTAAAATACAAAACACATGTTGATACAGTTCTTGCTTACCGTCAA
AAGTTTTTGGAGACATTTGGTAAACAGGAAACTAATAAACGATACTTGCATTATGCAGAAGGCCTCCAAATAGATTGGGA
GAAAATCAAAGCCAAAATTGAGATGGAAATTACAAAAGAAAGAGAGCAATCATCAAGCCAATCCAGCAAGAGTATAGGTT
TAAAGCCC
ATGAGACTAAAGATATCTCTTTTAAAAGAACCAAAACATCAAGAATTAGTAAGCTGTGTGGGCTGGACTACTGCTGAAGA
GCTGTATTCATGTAGTGATGATCACCAGATAGTGAAGTGGAACTTGTTAACCAGTGAAACAACTCAAATAGTAAAGCTTC
CTGATGATATTTACCCTATTGATTTTCACTGGTTTCCAAAAAGTTTGGGTGTAAAGAAACAAACCCAGGCAGAAAGCTTT
GTCCTCACAAGTTCTGATGGTAAATTTCATCTGATTTCCAAGTTAGGAAGAGTGGAAAAAAGTGTAGAAGCTCACTGTGG
AGCAGTACTTGCAGGAAGATGGAATTATGAAGGAACAGCATTAGTTACAGTTGGAGAAGATGGACAAATAAAAATTTGGT
CAAAGACTGGGATGCTTAGATCAACTTTAGCTCAGCAAGGAACACCAGTGTATTCAGTAGCGTGGGGCCCTGATTCAGAA
AAGGTTCTTTATACAGCAGGCAAGCAGCTAATCATTAAACCTCTTCAACCAAATGCTAAAGTTTTGCAGTGGAAAGCTCA
TGATGGCATTATTTTAAAAGTAGATTGGAACTCAGTCAATGACCTTATTTTATCTGCTGGTGAAGACTGTAAATATAAGG
TATGGGATAGTTACGGCCGCCCACTGTACAATTCACAACCTCATGAGCATCCCATTACTTCAGTTGCCTGGGCTCCAGAT
GGAGAATTATTTGCTGTTGGATCGTTTCATACTTTACGCTTGTGTGATAAAACTGGGTGGTCATATGCATTAGAAAAACC
CAACACTGGCAGCATATTTAATATTGCATGGTCTATCGATGGCACTCAGATTGCTGGAGCCTGTGGAAATGGACATGTTG
TTTTTGCACATGTGGTGGAACAACATTGGGAGTGGAAGAATTTTCAAGTAACATTAACTAAAAGAAGGGCCATGCAGGTT
CGTAATGTTCTTAATGATGCAGTGGATTTACTGGAATTCCGTGATAGAGTCATTAAAGCATCTTTGAACTATGCACACTT
AGTTGTTTCAACGTCTCTTCAATGTTACGTGTTCTCCACGAAGAACTGGAACACACCAATTATATTTGATCTCAAAGAAG
GAACTGTTAGTTTGATTCTGCAGGCAGAAAGACATTTTCTTCTTGTAGATGGTAGTAGTATCTATTTATATTCATATGAA
GGGCGCTTTATTTCATCTCCAAAATTTCCTGGAATGAGAACAGATATTCTGAACGCACAGACTGTGTCTTTGAGTAATGA
TACCATAGCAATAAGAGACAAAGCTGATGAAAAAATAATCTTCCTCTTTGAGGCATCAACTGGAAAGCCGTTAGGTGATG
GAAAGTTTCTTTCTCATAAGAATGAAATCTTGGAAATTGCTCTGGATCAAAAAGGACTTACCAATGATAGAAAAATTGCT
TTCATTGATAAAAATAGAGATCTCTGTATCACTTCTGTGAAACGATTTGGGAAGGAAGAACAAATTATCAAGCTTGGAAC
AATGGTGCATACTTTGGCATGGAACGATACATGCAATATCCTTTGTGGACTTCAAGATACTCGATTTATAGTGTGGTATT
ACCCCAATACAGTTTATGTGGACAGAGACATTTTGCCTAAAACATTATATGAAAGGGATGCAAGTGAATTTAGTAAAAAT
CCCCATATTGTGAGTTTTGTTGGAAATCAAGTAACTATTAGAAGAGCTGATGGCTCCCTGGTTCACATCAGCATATCACC
ATATCCTGCTATTCTCCATGAATATGTAAGCAGTTCAAAATGGGAAGATGCTGTAAGACTTTGTCGCTTTGTTAAGGAGC
AAACCATGTGGGCTTGTCTAGCTGCTATGGCAGTTGCTAATCGAGATATGACTACTGCAGAAATAGCCTATGCAGCAATT
GGTGAAATTGATAAGGTTCAGTACATCAATTCTATAAAAAATCTTCCATCTAAAGAATCAAAAATGGCCCACATACTACT
GTTTAGTGGGAACATACAGGAGGCTGAAATAGTACTTCTTCAGGCTGGCCTTGTTTATCAAGCAATCCAGATCAATATTA
ATCTCTACAACTGGGAAAGGGCACTGGAATTGGCTGTAAAATACAAAACACATGTTGATACAGTTCTTGCTTACCGTCAA
AAGTTTTTGGAGACATTTGGTAAACAGGAAACTAATAAACGATACTTGCATTATGCAGAAGGCCTCCAAATAGATTGGGA
GAAAATCAAAGCCAAAATTGAGATGGAAATTACAAAAGAAAGAGAGCAATCATCAAGCCAATCCAGCAAGAGTATAGGTT
TAAAGCCC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 7 .58 RPM |
| SRP007412_cerebellum | 6 .02 RPM |
| SRP007412_heart | 3 .35 RPM |
| SRP007412_kidney | 7 .74 RPM |
| SRP007412_liver | 4 .19 RPM |
| SRP007412_testis | 60 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000068885 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017282 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014255 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1055 | 74.05 | 56.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2951 | 73.38 | 56.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000015578 retrocopies