Parental gene:

CCNH, ENSPPYG00000015619

Aliases:None
Description:cyclin-H [Source:RefSeq peptide;Acc:NP_001153279]
Organism:Orangutan (Pongo abelii)
Coordinates:5:87869022..87887557(-)


>ENSPPYG00000015619
ATGTACCACAACAGTAGCCAGAAGCGGCACTGGACTTTCTCCAGTGAGGAGCAGCTGGCAAGACTGCGGGCCGACGCCAA
CCGCAAATTCAGATGCAAAGCCGTGGCCAACGGGAAGGTTCTTCCGAATGATCCAGTCTTTCTTGAGCCTCATGAAGAAA
TGACACTCTGCAAATACTATGAGAAAAGGTTATTGGAATTCTGTTCGGTGTTTAAGCCAGCAATGCCAAGGTCTGTTGTG
GGTACGGCTTGTATGTATTTCAAACGTTTTTACCTTAATAACTCAGTAATGGAATATCACCCCAGGATAATAATGCTCAC
TTGTGCATTTTTGGCCTGCAAAGTAGATGAATTCAATGTATCTAGTCCTCAGTTTGTTGGAAACCTTCGGGAGAGTCCTC
TTGGACAGGAGAAGGCACTTGAACAGATACTGGAATATGAACTACTTCTTATACAGCAACTTAATTTCCACCTTATTGTC
CACAATCCTTACAGACCATTTGAGGGCTTCCTCATCGACTTAAAGACCCGCTATCCCGTATTGGAGAATCCAGAGATTTT
GAGGAAAACAGCTGATGACTTTCTTAATAGAATTGCATTGACGGATGCTTACCTTTTGTACACACCTTCCCAAATTGCCC
TGACTGCCATTTTATCTAGTGCCTCCAGGGCTGGAATTACTATGGAAAGTTATTTATCAGAGAGTCTGATGCTGAGAGAG
AACAGAACTTGCCTGTCACAGTTACTAGATATAATGAAAAGCATGAGAAACTTAGTAAAAAAGTATGAACCACCCAGATC
TGAAGAAGTTGCTGTTCTGAAACAGAAGTTGGAGCGATGCCATTCTGCTGAGCTTGCACTTAACGTAATCACGAAGAAGA
GGAAAGGCTATGAAGATGATGATTACGTCTCAAAGAAATCCAAACATGAGGAGGAAGAATGGACTGACGACGACCTGGTA
GAATCTCTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .01 RPM
SRP007412_cerebellum 9 .61 RPM
SRP007412_heart 6 .59 RPM
SRP007412_kidney 6 .40 RPM
SRP007412_liver 7 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000007765 ortholog_one2one 1 retrogene
retro_dnov_1618,
Homo sapiens ENSG00000134480 ortholog_one2one 1 retrogene
retro_hsap_3128,
Gorilla gorilla ENSGGOG00000005172 ortholog_one2one 1 retrogene
retro_ggor_2143,
Macaca mulatta ENSMMUG00000003248 ortholog_one2one 1 retrogene
retro_mmul_1991,
Mus musculus ENSMUSG00000021548 ortholog_one2one 1 retrogene
retro_mmus_2510,
Nomascus leucogenys ENSNLEG00000013604 ortholog_one2one 1 retrogene
retro_nleu_2248,
Oryctolagus cuniculus ENSOCUG00000004659 ortholog_one2one 1 retrogene
retro_ocun_588,
Pan troglodytes ENSPTRG00000017063 ortholog_one2one 1 retrogene
retro_ptro_2116,
Ictidomys tridecemlineatus ENSSTOG00000000659 ortholog_one2one 1 retrogene
retro_itri_856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2584 76.99 69.35
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2. retro_pabe_2590 72.69 66.25
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Download FASTA sequences of all ENSPPYG00000015619 retrocopies