Parental gene: | NHP2, ENSPPYG00000016105 |
| Aliases: | None |
| Description: | H/ACA ribonucleoprotein complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5RC65] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:180703535..180712440(-) |
>ENSPPYG00000016105
ATGACCAAAATAAAGGCAGATCCCGACGGGCCCGAGGCTCAGGCGGAGGCGTGCTCCGGGGAGCGCACCTACCAGGAGCT
GCTGGTCAACCAGAACCCCATCGCGCAGCCCCTGGCTTCTCGCCGCCTCACGCGGAAGCTCTACAAATGCATCAAGAAAG
CGGTGAAGCAGAAGCAGATTCGGCGCGGGGTGAAAGAGGTTCAGAAATTTGTCAACAAAGGAGAAAAAGGCATCATGGTT
TTGGCAGGAGACACACTGCCCATTGAGGTATACTGCCATCTCCCAGTCATGTGTGAGGACCGAAATCTGCCCTATGTCTA
TATCCCCTCTAAGACGGACCTGGGTGCAGCCGCAGGCTCCAAGCGCCCCACCTGTGTGATAATGGTCAAGCCCCACGACG
AGTACCAGGAGGCTTACGACGAGTGCCTGGAGGAGGTGCAGTCCCTGCCCCTACCCCTATGA
ATGACCAAAATAAAGGCAGATCCCGACGGGCCCGAGGCTCAGGCGGAGGCGTGCTCCGGGGAGCGCACCTACCAGGAGCT
GCTGGTCAACCAGAACCCCATCGCGCAGCCCCTGGCTTCTCGCCGCCTCACGCGGAAGCTCTACAAATGCATCAAGAAAG
CGGTGAAGCAGAAGCAGATTCGGCGCGGGGTGAAAGAGGTTCAGAAATTTGTCAACAAAGGAGAAAAAGGCATCATGGTT
TTGGCAGGAGACACACTGCCCATTGAGGTATACTGCCATCTCCCAGTCATGTGTGAGGACCGAAATCTGCCCTATGTCTA
TATCCCCTCTAAGACGGACCTGGGTGCAGCCGCAGGCTCCAAGCGCCCCACCTGTGTGATAATGGTCAAGCCCCACGACG
AGTACCAGGAGGCTTACGACGAGTGCCTGGAGGAGGTGCAGTCCCTGCCCCTACCCCTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .20 RPM |
| SRP007412_cerebellum | 3 .77 RPM |
| SRP007412_heart | 1 .66 RPM |
| SRP007412_kidney | 4 .74 RPM |
| SRP007412_liver | 3 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012244 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000145912 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000015 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003839 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018757 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004231 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000001056 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016057 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000007907 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000004247 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000014032 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_481 | 96.73 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1704 | 96.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3143 | 74.84 | 99.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016105 retrocopies