Parental gene:

HNRNPAB, ENSPPYG00000016107

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034]
Organism:Orangutan (Pongo abelii)
Coordinates:5:180772824..180778678(+)


>ENSPPYG00000016107
ATGTTCGTTGGTGGCCTGAGCTGGGATACTAGCAAAAAAGATTTAAAAGACTATTTTACTAAATTTGGAGAGGTCGTTGA
CTGTACAATAAAAATGGATCCCAACACTGGACGGTCAAGAGGGTTTGGGTTTATCCTGTTCAAAGATGCAGCCAGTGTGG
AGAAGGTCCTAGACCAGAAGGAGCACAGGCTGGATGGCCGTGTCATTGACCCTAAAAAGGCCATGGCTATGAAGAAGGAC
CCGGTGAAGAAAATCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGAGTACTTTGGCGAGTTTGG
GGAGATTGAGGCCATTGAGCTGCCAATGGATCCAAAGTTGAACAAAAGACGAGGTTTTGTGTTTATCACCTTTAAAGAAG
AAGAACCCGTGAAGAAGGTTCTGGAGAAAAAGTTCCATACTATCAGTGGAAGCAAGNGTGAGATCAAGGTGGCCCAGCCC
AAAGAAGTCTATCAGCAGCAGCAGTATGGCTCTGGGGGCCGTGGAAACCGCAACCGAGGGAACCGAGGCAGCGGAGGTGG
TGGTGGAGGTGGAGGTCAGAGTCAGAGTTGGAATCAGGGCTACGGCAACTACTGGAACCAGGGCTACGGCTACCAGCAGG
GCTACGGGCCTGGCTATGGCGGCTACGACTACTCGCCCTATGGCTATTACGGCTACGGCCCCGGCTACGACTACAGTCAG
GGTAGTACAAACTACGGCAAGAGCCAGCGACGTGGTGGCCATCAGAATAACTACAAGCCATACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .88 RPM
SRP007412_cerebellum 8 .03 RPM
SRP007412_heart 12 .46 RPM
SRP007412_kidney 26 .52 RPM
SRP007412_liver 20 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000241 ortholog_one2one 2 retrogenes
retro_cfam_408, retro_cfam_412,
Homo sapiens ENSG00000197451 ortholog_one2one 1 retrogene
retro_hsap_962,
Loxodonta africana ENSLAFG00000001189 ortholog_one2one 1 retrogene
retro_lafr_405,
Macropus eugenii ENSMEUG00000007909 ortholog_one2one 2 retrogenes
retro_meug_169, retro_meug_246,
Myotis lucifugus ENSMLUG00000003380 ortholog_one2one 2 retrogenes
retro_mluc_2024, retro_mluc_2138,
Nomascus leucogenys ENSNLEG00000015775 ortholog_one2one 1 retrogene
retro_nleu_1611,
Oryctolagus cuniculus ENSOCUG00000026424 ortholog_one2one 3 retrogenes
retro_ocun_1800, retro_ocun_1811, retro_ocun_950,
Otolemur garnettii ENSOGAG00000030251 ortholog_one2one 2 retrogenes
retro_ogar_3509, retro_ogar_385,
Pongo abelii ENSPPYG00000012967 other_paralog 1 retrogene
retro_pabe_450,
Pongo abelii ENSPPYG00000025850 other_paralog 4 retrogenes
retro_pabe_1765, retro_pabe_2285, retro_pabe_3492, retro_pabe_3835,
Pan troglodytes ENSPTRG00000017601 ortholog_one2one 1 retrogene
retro_ptro_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_821 79.33 78.93
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000016107 retrocopies